Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 260 a.a., multidrug ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  130 bits (328), Expect = 2e-35
 Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 8/232 (3%)

Query: 10  RQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLIPGVVSM 69
           R+  RF R   RV+G++  PL++ +F G G+  +F  PA  E    V YL Y  PGV+ M
Sbjct: 14  REFTRFIRQPQRVVGTVAQPLLFWLFLGAGFGGSFR-PAGME---NVTYLEYFYPGVMLM 69

Query: 70  TVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQGVLIMVLSLF 129
            +   S  S +T+I D+  GFL+  LVAP SR   +LG+++G +  A+IQ ++  + + F
Sbjct: 70  MMLFASIFSSITIIEDRDAGFLQGVLVAPVSRLAIVLGKVLGATSIAMIQTLIFTIAAPF 129

Query: 130 LVSLNPFGMIPVIFTSFIL-AVAFASVGISLGLKINSQEGFHLIFGLLMQPLIFLSGAFY 188
           L      G + ++   F+L  + F+++G  L   + S   FH +  + + PL  LSGA +
Sbjct: 130 LGLHLGAGSLVLLLMGFLLTGIGFSALGFLLAWGMKSTSAFHAVMMVFLMPLWMLSGALF 189

Query: 189 PIDAMPTWMKILAYINPLTYAVDSARY-FLAGFSRFPIMLDVSILIVLSVFL 239
           PI  +P WMK +   NP+++A+   R  F  G  R  +  D   L+ L+V L
Sbjct: 190 PIGNVPAWMKAVMLANPVSHALVIIRAPFYGGPER--LFTDTHYLVSLAVTL 239