Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 376 a.a., ABC transport system, permease component YbhS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 63.2 bits (152), Expect = 8e-15
 Identities = 48/192 (25%), Positives = 98/192 (51%), Gaps = 14/192 (7%)

Query: 61  YLIPGVVS--MTVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALI 118
           ++IPG V+  MTV  G+ ++ + V  + + G ++  L    +R E +L +++      ++
Sbjct: 181 FIIPGAVTIIMTVI-GAILTSLVVAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGML 239

Query: 119 QGVLIMVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKI-----NSQEGFHLIF 173
             +L M++S+F++ +   G + ++F   I+   F    + +GL I     N      +  
Sbjct: 240 AMLLCMLVSVFILGVPYRGSLVILF---IITSLFLLSTLGMGLLISTITRNQFNAAQVAL 296

Query: 174 GLLMQPLIFLSGAFYPIDAMPTWMKILAYINPLTYAVDSAR-YFLAGFSRFPIMLDVSIL 232
                P I LSG  + ID+MP  ++ + YI P  Y V + +  FLAG    P++L V++L
Sbjct: 297 NAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAG--NIPVVLGVNVL 354

Query: 233 IVLSVFLVVLAM 244
            +++  ++ + +
Sbjct: 355 FLIASAVMFIGL 366