Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 368 a.a., predicted transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score = 70.1 bits (170), Expect = 6e-17
 Identities = 36/158 (22%), Positives = 82/158 (51%), Gaps = 2/158 (1%)

Query: 56  VDYLTYLIPGVVSM-TVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSI 114
           +DY  +++P +++M T      ++ ++V  +++ G L + LV+P +  +  +G+ +   I
Sbjct: 169 LDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALI 228

Query: 115 TALIQGVLIMVLSLFLVSLNPFGMIPVI-FTSFILAVAFASVGISLGLKINSQEGFHLIF 173
            A  Q  +++ + ++   +   G + +  FT  I  ++    G+ +    ++Q+   +  
Sbjct: 229 VATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGV 288

Query: 174 GLLMQPLIFLSGAFYPIDAMPTWMKILAYINPLTYAVD 211
            + M P I LSG   P++ MP W++ L +INP+ +  D
Sbjct: 289 FVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTD 326