Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 253 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 89.7 bits (221), Expect = 5e-23
 Identities = 61/242 (25%), Positives = 123/242 (50%), Gaps = 9/242 (3%)

Query: 4   FSAMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLI 63
           F A+    L    R +  ++ S+++P++    + I +  A    +  +  GGV Y  ++ 
Sbjct: 3   FEAIKSIYLFEMARTRRTLLQSVVSPVISTSLYFIVFGTAIG--SRIQEVGGVSYGAFIT 60

Query: 64  PGVVSMTVFSGSFISGVTVIWDKQF-GFLKETLVAPTSRSEAILGRIMGDSITALIQGVL 122
           PG++ +T+ +    +G   I+  +F G + E L AP S +E + G +   +   L+ G +
Sbjct: 61  PGLIMLTLLTQCISNGSFGIYFPKFTGTVYEILSAPVSMTEIVAGYVGAAATKGLMIGTI 120

Query: 123 IMVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPLIF 182
           I++ + F V +       ++    + AV+F+  G  +G+   + E  +LI  L++ PL F
Sbjct: 121 ILITASFFVDITIAHPFMMVLFFVLTAVSFSLFGFIIGIWATNFEQLNLIPMLVVPPLTF 180

Query: 183 LSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVFLVVL 242
           L G+FY ID +P + + +++ NP+ Y +   R+       F  + DV+ +I L++  + L
Sbjct: 181 LGGSFYSIDMLPPFWQTVSHFNPVLYLISGFRW------SFYEIADVNPVISLAMITLFL 234

Query: 243 AM 244
           A+
Sbjct: 235 AV 236