Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 257 a.a., Inner membrane transport permease YadH from Acinetobacter radioresistens SK82

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 53/250 (21%), Positives = 121/250 (48%), Gaps = 10/250 (4%)

Query: 3   AFSAMFYRQLRRFTRAKSRVI--GSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLT 60
           A   +  +++RRF R   + +   ++   L +++F  +  SR  +        GGV Y+ 
Sbjct: 9   ALGTLVRKEIRRFMRIWPQTLLPPAITMSLYFVIFGNLVGSRIGEM-------GGVSYMQ 61

Query: 61  YLIPGVVSMTVFSGSFISGVTVIWDKQFG-FLKETLVAPTSRSEAILGRIMGDSITALIQ 119
           +++PG++ M V + S+ +  +  +  +F   ++E +++P      + G ++G     ++ 
Sbjct: 62  FIVPGLIMMAVITNSYANVSSSFFSAKFQKSIEELIMSPMPLHLILWGYVIGGVCRGVLV 121

Query: 120 GVLIMVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQP 179
           G+++  +SLF   L+       IFT  + ++ F+  G    +   S +   +I   ++ P
Sbjct: 122 GIIVTAMSLFFTDLHITNWFVTIFTVIVTSLLFSLGGFINAVYAKSFDDISIIPTFVLTP 181

Query: 180 LIFLSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVFL 239
           L +L G FY I ++  + + L+ INP+ Y V++ R+ + G S   + + + ++ +     
Sbjct: 182 LTYLGGVFYAISSLSPFWQNLSLINPIVYMVNAFRFGILGHSDVNVSVSLVVVTLFCAVF 241

Query: 240 VVLAMYTFEK 249
             +A Y   +
Sbjct: 242 YGIAYYLLSR 251