Pairwise Alignments

Query, 433 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis S2

Subject, 545 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 9/160 (5%)

Query: 89  SSGTTGKPTVVGYTKKD--IRTWAELISRVVTAAGVTDDDTAQIAFGYGLFTGGFGLHYG 146
           +SGTTG P  V Y+ +   + T  EL        G++  +T  +          +G  Y 
Sbjct: 185 TSGTTGNPKGVLYSHRSTLLHTLMELAPDTF---GISSAETLMLIVPM-FHANAWGAPYA 240

Query: 147 LENVGAS-VIPMSSGNTEKQIMLMKDFETTVLICTPSYALYIAEVAEKMG-IDPKKDLKV 204
              VGA  V+P    + E    LM+D + T     P+  + + +  +K   IDP++    
Sbjct: 241 AAMVGARLVLPGPHLDGESVYTLMRDEKVTFSQGVPTVWMMLFQYLDKNPQIDPRQLGVK 300

Query: 205 RIGLFGGEACSESARTEIESKWGILATQNYGMSELMGPGV 244
           RIG+ GG A S +     E ++G    Q +GM+E    GV
Sbjct: 301 RIGI-GGAAVSRAVLERFEKQFGAEVVQGWGMTETSPIGV 339