Pairwise Alignments

Query, 386 a.a., homocitrate synthase family protein from Methanococcus maripaludis S2

Subject, 496 a.a., 2-isopropylmalate synthase from Bacteroides stercoris CC31F

 Score =  223 bits (569), Expect = 7e-63
 Identities = 135/367 (36%), Positives = 206/367 (56%), Gaps = 10/367 (2%)

Query: 19  YLYDTTLRDGEQTPGVCFAGDQKLEIAKKLDELKIKQIEAGFPIVSENERKAIKSITGEG 78
           +++DTTLRDGEQ PG      +K+++A++L+ L +  IEAGFPI S  +  ++  I+   
Sbjct: 6   FIFDTTLRDGEQVPGCQLNTVEKIQVARQLEALGVDVIEAGFPISSPGDFNSVIEISKAV 65

Query: 79  LNAQILALSRVLKEDIDKAIEC----DVDGIITFIATSPMHLKYKLHKNLDEVEEMGMKA 134
               I AL+R +++DID A E         I T I TS  H++YK + N +E+ E  + A
Sbjct: 66  TWPTICALTRAVQKDIDVAAEALQFAKHKRIHTGIGTSDSHIRYKFNSNREEIIERAVAA 125

Query: 135 VEYAKDHGLFVAFSAEDATRTPLEDIIRIHKNAEEHGADRVHIADTLGCATPQAMYHICS 194
           V+YA+ +   V F AEDA RT  E + R+ +   + GA  V+I DT G   P        
Sbjct: 126 VKYARRYVEDVEFYAEDAGRTDNEYLARVVEAVIKAGATVVNIPDTTGYCLPGEYGAKIK 185

Query: 195 ELSKHLKKAH---IGVHCHNDFGFAVINSIYGLIGGAKAVSTTVNGIGERAGNAAIEEIA 251
            L +H+   H   I  HCHND G A  N++ G++ GA+ V  T+NGIGERAGN ++EE+A
Sbjct: 186 YLMEHVDGIHNAVISTHCHNDLGMATANTMAGVLNGARQVEVTINGIGERAGNTSLEEVA 245

Query: 252 MALKVLYDHDM--GLNTEILTEISKLVENYSKIKIPENKPLVGEMVFYHESGIHVDAVLE 309
           M ++   D D+   +NT+ +   S++V +   + +  NK +VG   F H SGIH D VL+
Sbjct: 246 MIIRCHKDIDIETNINTQKIYPTSRMVSSLMNMPVQPNKAIVGRNAFAHSSGIHQDGVLK 305

Query: 310 NPLTYEPFLPEKIG-QKRKIILGKHSGCRAVAHRLQELGLEASRDELWEIVKKTKETRED 368
           N  TYE   P  +G     I+L   SG  A+ +RLQ LG+   + +L +I +   +  + 
Sbjct: 306 NVQTYEIIDPHDVGIDDNSIVLTARSGRAALKNRLQVLGVSLDQQKLDKIYEDFLKLADK 365

Query: 369 GTEISDE 375
             +I+D+
Sbjct: 366 KKDINDD 372



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 225 IGGAKAVSTTVNGIGER-----AGNAAIEEIAMALKVLYDHDMGLNTEILTEISKLVENY 279
           +G     S  +N  GE+     +GN  ++    ALK + D  M L    +  ISK  ++ 
Sbjct: 399 VGVRSVASIGLNISGEKFEAAASGNGPVDAAIKALKKIIDRHMTLKEFTIQAISKGSDDM 458

Query: 280 SKI 282
            K+
Sbjct: 459 GKV 461