Pairwise Alignments

Query, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

Subject, 610 a.a., Uncharacterized transporter YfbS from Escherichia coli ECRC62

 Score =  140 bits (352), Expect = 1e-37
 Identities = 71/189 (37%), Positives = 113/189 (59%), Gaps = 2/189 (1%)

Query: 37  IITLIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSRAFADFGNKWVVLFMAA 96
           I  L +L  A VLF T  + +   A+ V VA +  G   L+    F+ F +  VVL  A 
Sbjct: 6   IWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGT--LTVPEVFSGFSDPNVVLIAAL 63

Query: 97  FILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVM 156
           FI+G+ + RTG A  +G   VK AG S++K+++L+ML +  + AF+S+TG  A FIP+V+
Sbjct: 64  FIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIPVVL 123

Query: 157 GICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGI 216
            + +     P +L++P+++A  + G +TL+ TPPN +VN  L + G   F FF    IG+
Sbjct: 124 SVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGYHGFSFFSVTPIGL 183

Query: 217 LIFIVGILY 225
           ++ ++GILY
Sbjct: 184 VVLVLGILY 192



 Score =  134 bits (337), Expect = 8e-36
 Identities = 83/266 (31%), Positives = 135/266 (50%), Gaps = 18/266 (6%)

Query: 192 GLVNDALEKSGIAPFGFF--EFAKIGILIFIVGILYYGTIGHKLLPESKAKAKDFVSDTL 249
           GL    L+++G+A  G    E   +G +I +VG         KL+     + +DFV+  L
Sbjct: 352 GLNVVGLKRNGVALEGSLADEPLLLGDIILVVG-------NWKLIGMLAKQGRDFVALNL 404

Query: 250 KYRTNKMWIA-------TLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNS 302
               ++   A             +V +  T  IP   A ++   ++    CI  + A+ S
Sbjct: 405 PEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLMGKFRCIDAESAYKS 464

Query: 303 ISWTTIFLFAGMLPLGSAMAATGAATMIANTVITYV--HSPLALLAAAYILTALITEVMS 360
           I W +I L  GM+P   A+  TG   +    ++     + P  +L   ++L+A+I   +S
Sbjct: 465 IHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVIGLFIS 524

Query: 361 NTATAALVMPLGIALADAFDVSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKD 420
           NTATA L+ P+ +A A    VS  P  M +A+AAS+ F+TP+++P N ++LGPG YSF D
Sbjct: 525 NTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYSFSD 584

Query: 421 YAKSGWPLEILCAVVAIAVIPMIWPF 446
           + K G P  I+   V + +IPM++PF
Sbjct: 585 FVKLGVPFTIIVMAVCVVMIPMLFPF 610



 Score = 66.2 bits (160), Expect = 3e-15
 Identities = 44/188 (23%), Positives = 94/188 (50%), Gaps = 9/188 (4%)

Query: 256 MWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFAGML 315
           +W+ +L+   +VL  ATG + +    +       ++G +T+ E F+  S   + L A + 
Sbjct: 6   IWVLSLLAVAIVLF-ATGRVRMDAVALFVIVAFALSGTLTVPEVFSGFSDPNVVLIAALF 64

Query: 316 PLGSAMAATGAATMIANTVITYV-HSPLALLAAAYILTALITEVMSNTATAALVMPLGIA 374
            +G  +  TG AT++   ++    +S + +L    +  A +   MS+T   A+ +P+ ++
Sbjct: 65  IIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIPVVLS 124

Query: 375 LADAFDVSAKPILMAIAVAA-SSCFLTPIATPPNMII----LGPGGYSFKDYAKSGWPLE 429
           +A     S   ++M ++ A   S  +T +ATPPN+++    L  G + F  ++ +  P+ 
Sbjct: 125 VAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGYHGFSFFSVT--PIG 182

Query: 430 ILCAVVAI 437
           ++  V+ I
Sbjct: 183 LVVLVLGI 190



 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 19/203 (9%)

Query: 23  VDEESADGINSQKAIITLIILGTAAVLFFTEALPLPVTAMLVPVALS-FPGIDILSSSRA 81
           V E S     +  AI  L+++     L  T+ +P PV A++  + +  F  ID  S+ ++
Sbjct: 408 VSEASPAHSQAPHAIFCLVLM---VALMLTDEIPNPVAAIIACLLMGKFRCIDAESAYKS 464

Query: 82  FADFGNKW--VVLFMAAFILGEAVFRTG-FADKIGQLTVKAAGKSQLKLMLLVMLAIGTM 138
                  W  ++L +       A+ +TG  A  +  L     G     ++  + +    +
Sbjct: 465 I-----HWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVI 519

Query: 139 SAFLSNTGTTAAFIPIVMGICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDAL 198
             F+SNT T     PI +    +  + P    + +A AAS    +T + +P N LV    
Sbjct: 520 GLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAAS-AAFMTPVSSPVNTLV---- 574

Query: 199 EKSGIAPFGFFEFAKIGILIFIV 221
              G   + F +F K+G+   I+
Sbjct: 575 --LGPGNYSFSDFVKLGVPFTII 595