Pairwise Alignments

Query, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

Subject, 590 a.a., transporter from Agrobacterium fabrum C58

 Score =  112 bits (279), Expect = 4e-29
 Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 258 IATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFAGMLPL 317
           +  +V    +L   +G +P+  AF   A ++++ G I + E + SI    + + A ++P+
Sbjct: 399 LPVIVLAAAMLAAGSGLVPVSVAFFAAAFLMIVVGAIPLAEVYKSIDGPILVMLAALIPV 458

Query: 318 GSAMAATGAATMIANTVITYVHS--PLALLAAAYILTALITEVMSNTATAALVMPLGIAL 375
             ++  +GA+ +IA  + +      P A L    +    +T  ++N AT  ++ P+    
Sbjct: 459 SDSLRTSGASELIAGWLGSAAQGLPPFAALGMILLTAMAVTPFLNNAATVLVMAPIAAGF 518

Query: 376 ADAFDVSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKSGWPLEILCAVV 435
           A       +  LMA+A+ A   FLTPI    N +++GPGGY F DY + G PL I+  + 
Sbjct: 519 ATTLGFRPEAFLMAVAIGAGCDFLTPIGHQCNTLVMGPGGYRFSDYPRLGLPLSIMIVIA 578

Query: 436 AIAVIPMIWP 445
           +I ++  +WP
Sbjct: 579 SIPMLLYVWP 588



 Score = 93.6 bits (231), Expect = 2e-23
 Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 12/203 (5%)

Query: 37  IITLIILGTAAVLFFTEALPLPV---TAMLVPVALSFPGIDILSSSRAFADFGNKWVVLF 93
           I+  +++    V F  +     V   +A+LV VAL      ++  ++AF+ F +  V++ 
Sbjct: 6   ILAFVVIAGMMVAFIWDRFRYDVIACSALLVAVALG-----VVPFNKAFSGFSDDIVIIV 60

Query: 94  MAAFILGEAVFRTGFADK-IGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFI 152
            +A I+  AV R+G  D  I +   +   KS     L++M+A+  MSAF+ N G  A  +
Sbjct: 61  GSALIVSSAVARSGIVDMTIKKYFPEMRSKSLQLAFLMIMVAV--MSAFIKNIGALAIMM 118

Query: 153 PIVMGICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFA 212
           P+       +       L+PMA+AA LGG +T IGT PN +V+   E+     F  F+F 
Sbjct: 119 PVAFQFARKSGSPVSYYLMPMAFAALLGGLMTQIGTSPNIVVSRLREEMTGQSFTMFDFT 178

Query: 213 KIGILIFIVGILYYGTIGHKLLP 235
            +G  + ++GI++  T G++LLP
Sbjct: 179 PVGAALTVIGIIFL-TFGYRLLP 200



 Score = 42.0 bits (97), Expect = 5e-08
 Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 10/192 (5%)

Query: 34  QKAIITLIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSRAFADFGNKWVVLF 93
           ++A++ +I+L  AA+L     L +PV+      A     +  +  +  +       +V+ 
Sbjct: 395 RRALLPVIVLA-AAMLAAGSGL-VPVSVAFFAAAFLMIVVGAIPLAEVYKSIDGPILVML 452

Query: 94  MAAFILGEAVFRTGFADKI-GQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFI 152
            A   + +++  +G ++ I G L   A G      + +++L    ++ FL+N  T     
Sbjct: 453 AALIPVSDSLRTSGASELIAGWLGSAAQGLPPFAALGMILLTAMAVTPFLNNAATVLVMA 512

Query: 153 PIVMGICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFA 212
           PI  G   +   +P   L+ +A  A     LT IG   N LV       G   + F ++ 
Sbjct: 513 PIAAGFATTLGFRPEAFLMAVAIGAGC-DFLTPIGHQCNTLV------MGPGGYRFSDYP 565

Query: 213 KIGILIFIVGIL 224
           ++G+ + I+ ++
Sbjct: 566 RLGLPLSIMIVI 577