Pairwise Alignments

Query, 290 a.a., topoisomerase DNA-binding C4 zinc finger domain-containing protein from Methanococcus maripaludis S2

Subject, 184 a.a., Zn-finger domain associated with topoisomerase type I from Enterobacter asburiae PDN3

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 249 HSDENTCPWCGEKLRLIKTKKGEFLGCSSYPKCLYRRFLNKK 290
           H +E  CP CG +L +   K G FLGCS YP+C Y R L  +
Sbjct: 10  HKNE-PCPQCGAELVIRSGKHGPFLGCSHYPECDYVRPLKSQ 50



 Score = 37.7 bits (86), Expect = 2e-07
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 255 CPWCGEKLRLIKTKKGEFLGCSSYPKCLYRRFLNK 289
           CP CG +L L + + G F+GCS YP+C +   ++K
Sbjct: 64  CPVCGGELALRQGRFGMFIGCSRYPECEHTEQIDK 98