Pairwise Alignments

Query, 167 a.a., 3-isopropylmalate dehydratase small subunit from Methanococcus maripaludis S2

Subject, 175 a.a., 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 2e-27
 Identities = 58/159 (36%), Positives = 97/159 (61%), Gaps = 5/159 (3%)

Query: 8   KAWVFGDNIDTDAILPARYLVYTTEEQLAKYAMTGTDPEFPEKATVGDIIVGGKNFGCGS 67
           + W  G +IDTDA+ P   + +  +  +AK+ +    PEF  +   GD+IV G NFG GS
Sbjct: 13  RVWRVGADIDTDALAPGHAMKHGVDV-IAKHCLEAIRPEFAAQVRPGDVIVAGPNFGIGS 71

Query: 68  SREHAPIGLKGLGISMVIAESFARIFYRNSINIGFPLLECKDISKHVKEGDVLRVDLDKG 127
           SRE A   L  LG++ VIA S++ +++RN+ N+G  LL C + ++ ++EG+   + LD  
Sbjct: 72  SREQAAAVLVQLGVAAVIAPSYSGLYFRNAFNVGLLLLTCAE-AETLEEGE--SITLDTR 128

Query: 128 TVKNVTTGVE-LTGQNLPDFMMEILNNGGLMPHLKKKIS 165
           T    T G   L  + +PDF+ME+++ GGL+  L+++++
Sbjct: 129 TPALHTAGARALACEPVPDFLMEMVDAGGLLRLLRQRMA 167