Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 351 a.a., biotin synthase from Pseudomonas simiae WCS417

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 12/232 (5%)

Query: 78  CKYCGFAAGTSSEGYVKPFRSDDDQIKSSSVAIENSGIKRVSCSSGHGYNGKE----VIR 133
           CKYC   +G  + G  K    +  ++   +   +  G  R    +   +   +    V++
Sbjct: 63  CKYCP-QSGHYNTGLEKEKLMEVQKVLEEAARAKAIGSTRFCMGAAWKHPSAKDMPYVLQ 121

Query: 134 ALKAVKSASNLEVLVNAGADLTEECILELKKYKIDTICCNLETTNKTVFNNVKPGENLED 193
            +K VK A  LE  +  G  L ++    L +  +D    NL+T+ +  + ++       +
Sbjct: 122 MVKGVK-AMGLETCMTLGR-LDQDQTEALAQAGLDYYNHNLDTSPE-FYGSIITTRTYSE 178

Query: 194 RINVCKMVKKHGVELSSGLLIGIGETYEDRVEHLFFLKEL--DVEEIPIMGFNPYKETPM 251
           R+     V++ G+++ SG ++G+GE+ +DR   L  L  L    E +PI        TP+
Sbjct: 179 RLQTLAYVRESGMKICSGGILGMGESLDDRANLLIQLANLPEHPESVPINMLVKVAGTPL 238

Query: 252 ETCPKCSAIEQAKTIAIVRLLFPD--IRITSPTPTMGPELSQFALLGGASNI 301
           E        +  + +A+ R+L P   +R+++    M  ++   A   GA++I
Sbjct: 239 ENAEDIDPFDFIRMLAVARILMPQSHVRLSAGREAMNEQMQALAFFAGANSI 290