Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 352 a.a., 7 8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG from Methanococcus maripaludis S2

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 89/349 (25%), Positives = 149/349 (42%), Gaps = 55/349 (15%)

Query: 24  LITKSDAIELFNIKNWKDYLELFSIASEVRDVFKTEIEITSTVHVT-NICSVNPKCKYCG 82
           +ITKS+A+         D+L+  S  S +  + K   E TS  HVT +  +  P C +C 
Sbjct: 1   MITKSEAL---------DFLKSNSTNSILEKLGKINAENTSK-HVTFSKNAFIPVCNWCR 50

Query: 83  FAAGTSSEGYVKPFRSDD------DQIKSSSVAIENSGIKRVSCSSGHGYNGKEVIRA-L 135
              G  +      FR+++      D++K      +  G +    + G   +  E ++  L
Sbjct: 51  NVCGYCT------FRNENFKLLKMDEMKEILTKADTFGCREALFTFGENVDENEKVKEEL 104

Query: 136 KAVKSASNLEVLVNAGADLTEECIL------------ELKKYKIDTICCNLETTNK---- 179
           K +  +  LE L    A   E   L            ELK  +       L   N     
Sbjct: 105 KKMGYSGILEYLYEISAWCLENTNLIPHTNCGILSYDELKYLREVNASMGLMLENSSARL 164

Query: 180 --TVFNNVKPGENLEDRINVCKMVKKHGVELSSGLLIGIGETYEDRVEHLFFLKEL---- 233
             T+ +   PG++ + RI + +   K  +  ++G+LIGIGET+E+RV  +F +K +    
Sbjct: 165 CGTIAHEKSPGKDPKLRIEMIENAGKLKIPFTTGILIGIGETFEERVNSIFEIKRIHEKY 224

Query: 234 -DVEEIPIMGFNPYKETPMETCPKCSAIEQAKTIAIVRLLFPDIRITSPTPTMGPELSQF 292
             ++E+ +  F    + PME   + S +E  K I + +L+  DI I  P P +  E  Q 
Sbjct: 225 GHIQEVIVQNFRSKPQIPMENYKEPSPVEMFKMIILSKLILEDISIQVP-PNLNRETGQL 283

Query: 293 ALLGGASNIATVIPDNHPMNIKGVGNPKT--GNLKDVICMIKELGLTPK 339
            L+ G  +   V P       K   NP+    +++++    KELG T K
Sbjct: 284 FLMAGIDDWGGVSP-----LTKDFVNPEAPWPDIEELNIFSKELGFTLK 327