Pairwise Alignments

Query, 388 a.a., formate-dependent phosphoribosylglycinamide formyltransferase from Methanococcus maripaludis S2

Subject, 1073 a.a., Carbamoyl-phosphate synthase large chain from Escherichia fergusonii Becca

 Score = 55.8 bits (133), Expect = 6e-12
 Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 41/188 (21%)

Query: 5   PLFSNAKKILLLGSGELGKEVIIEAQRFGVECIAVDSYENAPAMQVAHK--YHII----- 57
           P  ++ K IL+LG+G +   VI +A  F         Y  A A +   +  Y +I     
Sbjct: 2   PKRTDIKSILILGAGPI---VIGQACEF--------DYSGAQACKALREEGYRVILVNSN 50

Query: 58  --------DMKDAG--------ALRAVIEKEKPDLIVPEIEAINT-DTLKEMESEGY--- 97
                   +M DA          +R +IEKE+PD ++P +      +   E+E +G    
Sbjct: 51  PATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEE 110

Query: 98  HVVPTANATKLTMDREGIRR---LAFEKLGLRTAKYEFAENLEELKEAVTRIGIPCIIKP 154
             V    AT   +D+   RR   +A +K+GL TA+   A ++EE       +G PCII+P
Sbjct: 111 FGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVGFPCIIRP 170

Query: 155 IMSSSGKG 162
             +  G G
Sbjct: 171 SFTMGGSG 178



 Score = 48.5 bits (114), Expect = 9e-10
 Identities = 66/318 (20%), Positives = 125/318 (39%), Gaps = 24/318 (7%)

Query: 68  VIEKEKPDLIVPEIEAINTDTL-KEMESEGYHVVPTA-NATKLTMDREGIRRLAFEKLGL 125
           ++  EKP  ++ +        L + +E+ G  V+ T+ +A     DRE  +  A E+L L
Sbjct: 629 IVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQH-AVERLKL 687

Query: 126 RTAKYEFAENLEELKEAVTRIGIPCIIKPIMSSSGKGQSTIKSESDIKTAWNYAKSAARG 185
           +         +E   E    IG P +++P     G+    +  E+D++  +  A S +  
Sbjct: 688 KQPANATVTTIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSN- 746

Query: 186 IGTKVIVEEFIKFDYEITLLTARTAEGTRFCEPIGHIQV----DGDYHESWQPHPMCAPT 241
               V+++ F+    E+ +      E       + HI+      GD   S   + +    
Sbjct: 747 -DAPVLLDHFLDDAVEVDVDAICDGEVVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEI 805

Query: 242 KAKAQEMAKKITDELGGYGIFGVELFVLDDEVIFSEVSPRPHDTGMVTMVTQKMSEFEIH 301
           +   ++  +K+  EL   G+  V+  V ++EV   EV+PR   T         +   ++ 
Sbjct: 806 QDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVA 865

Query: 302 ARAILGLPVNVDIVSPGASHVIKSEILKWAPEYEIHEA----SKVKDTKIRLFGKPIAKV 357
           AR + G  +        A   +  E++   P Y + E     +K       L G  +   
Sbjct: 866 ARVMAGKSL--------AEQGVTKEVI--PPYYSVKEVVLPFNKFPGVD-PLLGPEMRST 914

Query: 358 GRRMGVALAVSDDVIKAR 375
           G  MGV    ++   KA+
Sbjct: 915 GEVMGVGRTFAEAFAKAQ 932