Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 385 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  228 bits (580), Expect = 2e-64
 Identities = 125/310 (40%), Positives = 187/310 (60%), Gaps = 25/310 (8%)

Query: 3   LRLENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLN 61
           ++++ ++K F     L +   +  + E ++L+G SGCGKTT L +IAGF + D G+IF+ 
Sbjct: 30  VQIDGVTKRFGDATALHEAWLKIADGEFMTLLGPSGCGKTTLLNLIAGFLEADGGEIFVG 89

Query: 62  GEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNL 121
           G  +T   P  R IG+VFQNYALFPH+NV +N+ YGL+++  +  +I  +V  ++ LV L
Sbjct: 90  GRLMTETAPYDREIGVVFQNYALFPHMNVAKNVGYGLRMRGVAKSEIETRVAEALALVKL 149

Query: 122 GGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNF 181
            G+ +    +LSGG QQRVA+ARA+VI PK +LLDEP S LD  LR  M+ ELKE+QR  
Sbjct: 150 DGFGERKPRQLSGGQQQRVALARALVIRPKVLLLDEPFSALDKNLRGAMQVELKEIQRRL 209

Query: 182 EIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIP-- 239
            + TI+VTHDQ EAL++SD++AVM++G+I Q G P  IY  P   FVA F+G +N +P  
Sbjct: 210 GVTTIFVTHDQSEALSMSDRIAVMSQGRIRQVGTPDEIYRRPLDPFVASFVGDVNVLPGR 269

Query: 240 -----------LSILNELDIESGDKK---------YFVRPESIEI--GKGNFKGKLVDYE 277
                      L     L + +   +          FVRP+++ I  G+G   G +  + 
Sbjct: 270 LERRIGETATVLIAEGRLSVSADTLEGIAPGAAVDLFVRPDAVRIAEGEGLVSGTVATHV 329

Query: 278 FLGSIIRYVI 287
           + GS +  ++
Sbjct: 330 YQGSHVDVLV 339