Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 355 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Xanthobacter sp. DMC5

 Score =  221 bits (564), Expect = 2e-62
 Identities = 109/242 (45%), Positives = 168/242 (69%), Gaps = 4/242 (1%)

Query: 3   LRLENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLN 61
           L L+ + K+F +  VL  ID +    E+V +VG+SGCGK+T LRI+AG E+P +G+I L+
Sbjct: 4   LTLDQVRKSFGRTEVLRGIDLDVAPGEMVVVVGASGCGKSTLLRIVAGLEQPSSGRIMLD 63

Query: 62  GEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNL 121
           GEDIT+  P  R+I +VFQ+YAL+PH++VF+N+AYGLK+++    +I+ +V+ +  ++++
Sbjct: 64  GEDITSRDPAARDIAMVFQHYALYPHMSVFDNMAYGLKVRRLPRAEIAARVEEAAQMLHI 123

Query: 122 GGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNF 181
                    ELSGG +QRVAI RA+V +P+  L DEPLS+LDA+LR  MR E++ LQR  
Sbjct: 124 SPLLGRKPRELSGGQRQRVAIGRAVVRKPRLFLFDEPLSSLDARLRTSMRAEIRRLQRRL 183

Query: 182 EIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPLS 241
            + ++YVTHDQ EA+++ D++ V+N G+  Q G P  IY+ P    VA+ IG   + P++
Sbjct: 184 GVTSLYVTHDQHEAMSLGDRILVLNEGRPAQLGPPMEIYARPADTAVAELIG---DPPMN 240

Query: 242 IL 243
           +L
Sbjct: 241 LL 242