Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 329 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  227 bits (578), Expect = 3e-64
 Identities = 121/287 (42%), Positives = 191/287 (66%), Gaps = 4/287 (1%)

Query: 5   LENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLNGE 63
           ++++ K++    V +DI+ E  + E V+L+G SGCGK+T LR IAG    D+GKI L+ +
Sbjct: 6   VQHLQKSYAGTPVFSDINCEVAKGEFVTLLGPSGCGKSTLLRCIAGLTSVDSGKILLDDQ 65

Query: 64  DITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNLGG 123
           DI  + P KR+IG+VFQ+YALFP++ V +N+A+GL+++K +  D  K+V+  + LV L  
Sbjct: 66  DIVPLSPQKRHIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADDSHKRVQEVLQLVELKD 125

Query: 124 YE-KYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNFE 182
              +YP  ++SGG  QRVA+AR++V  P+ +LLDEPLS LDA++R  +R++++++QR   
Sbjct: 126 LAGRYP-HQMSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQRELG 184

Query: 183 IPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPLSI 242
           + TI+VTHDQEEAL +SD++ +MN+GKI Q GD  ++Y+ P   F A FIG  N +    
Sbjct: 185 LTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDVFAAGFIGNYNLLDADK 244

Query: 243 LNELDIESGDKKYFVRPESIEIGK-GNFKGKLVDYEFLGSIIRYVIK 288
             +L       +  +RPE+IE+ + G     +  +  LG++IRY I+
Sbjct: 245 ATQLLQRPISSRIAIRPEAIELSRTGELDALVRSHSLLGNVIRYRIE 291