Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 344 a.a., polyamine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  240 bits (613), Expect = 3e-68
 Identities = 127/275 (46%), Positives = 178/275 (64%), Gaps = 10/275 (3%)

Query: 21  IDFECGEELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLNGEDITNVPPNKRNIGLVFQ 80
           ID + GE   S++G SG GKTTCLR+IAGFE+P AG I ++GE+   +PP +R++  VFQ
Sbjct: 25  IDIQDGE-FFSMLGPSGSGKTTCLRLIAGFEQPSAGSIRIHGEEAAGLPPYQRDVNTVFQ 83

Query: 81  NYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNLGGYEKYPISELSGGMQQRV 140
           +YALFPH+NV +N+AYGLK+K     +   + + ++ +V LGGY      +LSGG +QRV
Sbjct: 84  DYALFPHMNVRDNVAYGLKVKGVGKTERMNRAEEALGMVALGGYGDRKPVQLSGGQRQRV 143

Query: 141 AIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNFEIPTIYVTHDQEEALAISD 200
           A+ARA+V  P+ +LLDEPL  LD KLR +M+ ELK+LQR   I  I+VTHDQ EAL++SD
Sbjct: 144 ALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKLQRQLGITFIFVTHDQTEALSMSD 203

Query: 201 KVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPLSILNELDIESGDKKYFVRPE 260
           +VAV N+G+IEQ   P ++Y  P T FVA+F+G  N I   +   L      + + +RPE
Sbjct: 204 RVAVFNKGRIEQVDTPRNLYMKPATSFVAEFVGTSNVIRGELAQRLG--GTAQPFSIRPE 261

Query: 261 SIEIGKG-------NFKGKLVDYEFLGSIIRYVIK 288
            +   +G          G L D ++ GS  RY +K
Sbjct: 262 HVRFAEGPLGTGEVEISGLLHDIQYQGSATRYELK 296