Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 359 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  241 bits (616), Expect = 1e-68
 Identities = 134/304 (44%), Positives = 191/304 (62%), Gaps = 27/304 (8%)

Query: 3   LRLENISKNFEKHGVLT--DIDFECGEELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFL 60
           L L  I K+F    VL   D+D E GE  V L+G SGCGKTT LRI+ G E+ D+G+I L
Sbjct: 7   LSLRGIGKSFGATRVLDGIDLDIEPGE-FVCLLGPSGCGKTTLLRIVCGIERADSGQILL 65

Query: 61  NGEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVN 120
            G+DI  +PP  R  G+VFQ+YALFP+L   +NIAYGL        +++K+ +  +DLV 
Sbjct: 66  GGQDIAGLPPAARGFGVVFQSYALFPNLTAAQNIAYGLHPTGALAREMAKRSREMLDLVG 125

Query: 121 LGGY-EKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQR 179
           L  + +KYP+ +LSGG QQRVA+ARA+   P+ +LLDEPLS LDA++R  +R E++ LQ+
Sbjct: 126 LAAHADKYPV-QLSGGQQQRVALARALAPNPRLLLLDEPLSALDAQVRASLRSEIRALQK 184

Query: 180 NFEIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIP 239
              I TI VTHDQEEAL+++D+V +M+ G+IEQ G P  +Y  P+T FVA F+G +N +P
Sbjct: 185 RLGIVTIMVTHDQEEALSMADRVVLMHNGRIEQAGTPDELYRQPRTRFVAGFVGRMNMLP 244

Query: 240 LSILNELDIESGDKKYF---------------VRPESI-------EIGKGNFKGKLVDYE 277
            ++L +  +   D + F               +RPE +       E+G  +F  +L+D E
Sbjct: 245 ATVLADGKVRVRDSELFCAPGNLSVGSQATVGIRPEHVVVKRYGTELGANSFAARLLDTE 304

Query: 278 FLGS 281
           F G+
Sbjct: 305 FFGN 308