Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 357 a.a., ABC-type spermidine/putrescine transport systems, ATPase components from Variovorax sp. SCN45

 Score =  223 bits (569), Expect = 4e-63
 Identities = 128/315 (40%), Positives = 195/315 (61%), Gaps = 27/315 (8%)

Query: 3   LRLENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLN 61
           LRL +++K +     ++ ++    + E VSL+G SGCGKTT L++IAGFE   +G+I L 
Sbjct: 4   LRLTDVTKFYGATRAVSAMNLAVEKGEFVSLLGPSGCGKTTTLQMIAGFEAVSSGRIELA 63

Query: 62  GEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNL 121
           G+DIT+   N R +G+VFQ YALFPH+ V +N+++GL+++K    + +++VK ++ LV+L
Sbjct: 64  GKDITHAKANTRGLGIVFQTYALFPHMTVADNVSFGLEMRKMPKAERTERVKQALALVHL 123

Query: 122 GGYE-KYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRN 180
             +  +YP  ELSGG +QRVA+ARA+VIEP  +LLDEPLSNLDAKLR +M+ EL+++QR 
Sbjct: 124 EAHAARYP-RELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQIQRK 182

Query: 181 FEIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPL 240
               T+ VTHDQ EA++ISD+V VM  G   Q   P  +Y +P T F++ F+G  N +  
Sbjct: 183 VGTTTVMVTHDQSEAMSISDRVVVMEGGCATQIDHPQRVYEHPSTRFISTFVGKANLLDC 242

Query: 241 SI-----------LNELDIESGDKKY--------FVRPESIEI---GKGNFKGKLVDYEF 278
            +           +  L ++  D  +         VRPE +++   G+G   G++ +  F
Sbjct: 243 RVSGSGAARTCVEVGALSLDVDDTGFRVDTAALLSVRPEKLQLVPTGRGRIDGEVQERFF 302

Query: 279 LGS--IIRYVIKYGD 291
           LGS  + R     GD
Sbjct: 303 LGSQWLYRIATPVGD 317