Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 342 a.a., KEGG: putative spermidine/putrescine transport system ATP-binding protein from Variovorax sp. SCN45

 Score =  228 bits (580), Expect = 2e-64
 Identities = 122/308 (39%), Positives = 191/308 (62%), Gaps = 24/308 (7%)

Query: 1   MDLRLENISKNF--EKHGVL-TDIDFECGEELVSLVGSSGCGKTTCLRIIAGFEKPDAGK 57
           M L L+N++ N+    HG+    +D   GE LV+++G SG GK+T L++++G E    G+
Sbjct: 1   MSLLLDNVNYNYPGSTHGLHDVSLDVRTGE-LVAVIGPSGSGKSTLLKLVSGLETGHTGR 59

Query: 58  IFLNGEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSID 117
           I L+GED++  P ++RNIG+VFQ+YALFPHL+V +N+AYGLKL+K    +  ++ +  +D
Sbjct: 60  IALDGEDMSRTPVHQRNIGMVFQSYALFPHLSVLDNVAYGLKLRKVGTAERRQRAQELLD 119

Query: 118 LVNLGGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKEL 177
           +V LG +    +++LSGG QQRVA+ARA+ I+P+A+LLDEPLS LDA +R  +R +++ +
Sbjct: 120 IVGLGDFSARAVAQLSGGQQQRVALARALAIDPRALLLDEPLSALDASVRGHLRDQIRSI 179

Query: 178 QRNFEIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINE 237
           Q+ F   T+ VTHDQEEAL ++D+VA++  G++ Q   P  IY NP +  VA+F+G+   
Sbjct: 180 QQRFNATTLLVTHDQEEALVMADRVAMLKDGRLLQIATPRDIYENPASRAVAEFVGLSTI 239

Query: 238 IPLSI---------LNELDIESGDKKY------FVRPESIEIGK-----GNFKGKLVDYE 277
           +P  +           EL   +G + +       VRPE I            +G      
Sbjct: 240 LPAKVSGADLLDLGFAELAAPTGRRAFGAEVHVLVRPEHIRPDPAPGTVNRLEGSTRAQR 299

Query: 278 FLGSIIRY 285
           +LG++ RY
Sbjct: 300 YLGALTRY 307