Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  226 bits (575), Expect = 8e-64
 Identities = 123/316 (38%), Positives = 184/316 (58%), Gaps = 28/316 (8%)

Query: 3   LRLENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLN 61
           L L+ + K +  H   + +     + E +SL+G SGCGKTT LR++AG  +P  G+I ++
Sbjct: 4   LTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRILVD 63

Query: 62  GEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNL 121
           G DIT +P N+RNIGLVFQ+YALFPH++VFEN+A+GL+ +     ++ ++V  ++  V L
Sbjct: 64  GRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALASVRL 123

Query: 122 GGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNF 181
                    +LSGG QQRVA+AR+I   P  +L DEPLSNLDA LR +M+ ELK LQR  
Sbjct: 124 SALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRLQREV 183

Query: 182 EIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPLS 241
            I T++VTHDQ EA+++SD+V V+  G ++QF  P +IY  P T FVA FIG  N +   
Sbjct: 184 GITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGRPNRLTGR 243

Query: 242 ILN--------ELD-------------IESGDKKYFVRPESIEI------GKGNFKGKLV 274
           ++         +LD             ++       +R E I        G     G++ 
Sbjct: 244 VVRANGASAAVQLDDGPMLPASAAEGMVQGAAVDVVIRQEDIRFADAPSPGAATLAGRVA 303

Query: 275 DYEFLGSIIRYVIKYG 290
              F+G+ ++Y++ +G
Sbjct: 304 MRSFVGARVQYLLAFG 319