Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 353 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  224 bits (571), Expect = 2e-63
 Identities = 122/289 (42%), Positives = 184/289 (63%), Gaps = 24/289 (8%)

Query: 3   LRLENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLN 61
           L L N+ K +    V+ D+  +  + ELV+L+G SGCGKTT LR+IAGF +   G I ++
Sbjct: 4   LELNNVRKQYGALAVVDDLSLQLRKGELVTLLGPSGCGKTTTLRMIAGFIELSGGSIAVD 63

Query: 62  GEDITN----VPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSID 117
           G  I+     VPP  R + ++FQ+YA++P++ V EN+A+GL +++    +  ++V+  +D
Sbjct: 64  GRQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVAFGLNVRRVPGEESKRRVEEMLD 123

Query: 118 LVNLGGY-EKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKE 176
           +V LG   ++YP +ELSGG QQRVA+ARA+V+ P+ +LLDEPLSNLDA LR +M  E++ 
Sbjct: 124 VVKLGALAQRYP-AELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMAGEIRR 182

Query: 177 LQRNFEIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIIN 236
           L   F   T+YVTHDQ EA+ ISD++AV+N GK+EQ   P+++Y+ P+T FVA FIG  N
Sbjct: 183 LHDEFNFTTVYVTHDQTEAMTISDRIAVLNLGKLEQIDTPWNLYNRPRTRFVAGFIGQTN 242

Query: 237 ----------------EIPLSILNELDIESGDKKYFVRPESIEIG-KGN 268
                           E  L +  +    S D +  +RP+S+ +G +GN
Sbjct: 243 LVEGHVRDGQIRLRGLEGVLPMGGQAAAASADMRISIRPQSLFLGPQGN 291