Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 338 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  228 bits (580), Expect = 2e-64
 Identities = 115/286 (40%), Positives = 179/286 (62%), Gaps = 6/286 (2%)

Query: 26  GEELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLNGEDITNVPPNKRNIGLVFQNYALF 85
           G E  +L+G SG GKTTCLR+I GF  P +G+I + G+D++++PP  R +  VFQ+YALF
Sbjct: 33  GGEFFTLLGPSGSGKTTCLRMIGGFTLPTSGRILIGGQDVSHLPPYARPVNTVFQDYALF 92

Query: 86  PHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNLGGYEKYPISELSGGMQQRVAIARA 145
           PH+N+ +N+AYGL ++         + +  +DLV L G       +LSGG +QRVA+ARA
Sbjct: 93  PHMNIRDNVAYGLMVQGVDKSARHARAEQMLDLVRLSGVGARRPGQLSGGQRQRVALARA 152

Query: 146 IVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNFEIPTIYVTHDQEEALAISDKVAVM 205
           ++ +P+ +LLDEPL  LD KLR +M+ ELK LQR   I  +++THDQ EAL++SD++ V 
Sbjct: 153 LINQPQVLLLDEPLGALDLKLREQMQTELKALQRQLGITFLFITHDQHEALSMSDRIGVF 212

Query: 206 NRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPLSILNELDIESGDKKYFVRPESIEIG 265
           + G++EQ G P +IY+ P T FVA+F+G  N    +   E+   +G     +RPE I +G
Sbjct: 213 SNGRLEQVGAPQAIYNQPATRFVAEFVGAANVFDGARAREI---AGVDSVMLRPERIRLG 269

Query: 266 ---KGNFKGKLVDYEFLGSIIRYVIKYGDSLFTIQSNKLVDFKLGT 308
              +    G ++D ++ GS  R  + +G    ++  +  ++ +L T
Sbjct: 270 ASSQARLSGAVIDAQYFGSFSRVRVDWGGEAVSVDLSPELNPELPT 315