Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 378 a.a., spermidine/putrescine ABC transporter ATP-binding protein PotA from Escherichia coli ECRC62

 Score =  232 bits (592), Expect = 9e-66
 Identities = 132/299 (44%), Positives = 182/299 (60%), Gaps = 25/299 (8%)

Query: 3   LRLENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLN 61
           ++L  I K F+   V+  +D      E ++L+G SGCGKTT LR+IAG E  D+G+I L+
Sbjct: 18  VQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLD 77

Query: 62  GEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNL 121
            EDIT+VP   R +  VFQ+YALFPH+ VFEN+A+GL+++K    +I+ +V  ++ +V L
Sbjct: 78  NEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQL 137

Query: 122 GGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNF 181
             + +    +LSGG QQRVAIARA+V +P+ +LLDE LS LD KLR +M+ ELK LQR  
Sbjct: 138 ETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKL 197

Query: 182 EIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPLS 241
            I  ++VTHDQEEAL +SD++ VM  G+IEQ G P  IY  PK  FVA FIG IN    +
Sbjct: 198 GITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNAT 257

Query: 242 ILNELD--------------------IESGDKKY-FVRPESI---EIGKGNFKGKLVDY 276
           ++  LD                    +E G K +  +RPE +   EI   N    L+ Y
Sbjct: 258 VIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGY 316