Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  222 bits (565), Expect = 1e-62
 Identities = 124/304 (40%), Positives = 185/304 (60%), Gaps = 16/304 (5%)

Query: 2   DLRLENISKNFEKHGVL--TDIDFECGEELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIF 59
           +L + NISK++     L    I  E GE  V+++G SGCGK+T LRI+ G  +P  G+I 
Sbjct: 3   ELEISNISKDYGASRALHPVSITVERGE-FVTILGPSGCGKSTLLRILTGISQPSGGEIR 61

Query: 60  LNGEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLV 119
           L G+ I    P  R+I +VFQ+YALFPH++V +N+ +GLK+KK +  + ++++ +++++ 
Sbjct: 62  LGGKRIDQAQPEARDIAMVFQSYALFPHMSVAKNLGFGLKMKKVAKDERARRIAHALEIC 121

Query: 120 NLGGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQR 179
           NL G       +LSGG QQRVA+ARAIV++P  +L DEPLSNLDAKLR  +R EL EL R
Sbjct: 122 NLTGLVDRMPRQLSGGQQQRVALARAIVMQPSLLLFDEPLSNLDAKLRDTLRHELTELHR 181

Query: 180 NFEIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIP 239
                ++YVTHDQ EA+A+SD++ VMN G++ + G P  +Y  PK  F A F+G  N +P
Sbjct: 182 RIGATSLYVTHDQAEAMAMSDRIVVMNAGRVVEIGTPLELYRAPKHAFTAGFLGQTNLLP 241

Query: 240 LSILNE-----------LD-IESGDKKYFVRPESIEIGKGNF-KGKLVDYEFLGSIIRYV 286
           +S   +           LD   +G+ +   RPE+I I       G +    F+G+   Y 
Sbjct: 242 VSAEGQQAQLPWGQSVTLDQAAAGNVQISARPENIHICADQAGDGTVSAVSFMGANALYT 301

Query: 287 IKYG 290
           ++ G
Sbjct: 302 VEIG 305