Pairwise Alignments

Query, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 55/221 (24%), Positives = 109/221 (49%), Gaps = 7/221 (3%)

Query: 45  FTLDAYSKFISDSYYFGILKNSIVVACFSTIISIFLGFLFSIIIFKTDFKFKNFFKIAVF 104
           FT   Y +  +D Y+  +L  ++ VA  +T+I++ +G      + +   ++K +  +A  
Sbjct: 41  FTPRNYVQVFADPYFREVLSTTLQVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATI 100

Query: 105 LPIITPGFISSLAYVFLFGRHG----AVTYGLLGLEPN--IYGWKSVVIMQSIDYTTTAF 158
           LP++    + S  ++ L G  G       +  L  EP   ++   +VV +          
Sbjct: 101 LPLMVGNVVRSAGWLALLGNSGLFNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMV 160

Query: 159 FIISAVLLGISGEFEDAARNLGSNEFQVFKKVTFPLLIPGILSAGLLIFMQSMADFGTPI 218
             +++V+ GI    E+AA NLG+  F VF++V  P  +PG+++   L+F+  M  + TP+
Sbjct: 161 MTLASVIEGIPRNVEEAAANLGARPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPV 220

Query: 219 IVGG-NFNTLATASYFEIIGRYNTQMASTLSVILLFPSMAL 258
           ++GG  F  +    Y + +G  N    + L+ +LL  ++A+
Sbjct: 221 LIGGPRFRMMTPEIYQQFVGLNNWPFGAALAFMLLAVTLAV 261



 Score = 53.9 bits (128), Expect = 7e-12
 Identities = 47/222 (21%), Positives = 87/222 (39%), Gaps = 25/222 (11%)

Query: 326 YFYEAISAGQLAIKNTLIYAMSSSILVAFLGVAYSYIVYRGKFFGRKLMDLVITLPFAIP 385
           YF E +S        TL  A  ++++   +G+   Y + R     +  + L   LP  + 
Sbjct: 54  YFREVLST-------TLQVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATILPLMVG 106

Query: 386 GTFMGLGYLLAFNNY---------------PLLLTGTSSIIILNCMVRKLPFSFKTGNSV 430
                 G+L    N                P+ L      ++   +   LP    T  SV
Sbjct: 107 NVVRSAGWLALLGNSGLFNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASV 166

Query: 431 LSQVEESVEEASLNLGASRLKTFYNVVLPLLKPAIIFSMIYTFIATIKSLGSIIFLMTAN 490
           +  +  +VEEA+ NLGA     F  VVLP   P +I  M   FI  + +  + + +    
Sbjct: 167 IEGIPRNVEEAAANLGARPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPR 226

Query: 491 TKVLSAMVFESTI---NRQLGVGACYSMFMVILSIIGILGIL 529
            ++++  +++  +   N   G    + +  V L+++  +G L
Sbjct: 227 FRMMTPEIYQQFVGLNNWPFGAALAFMLLAVTLAVVLGIGAL 268