Pairwise Alignments

Query, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 268 a.a., ABC transporter membrane spanning protein (spermidine/putrescine) from Agrobacterium fabrum C58

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 30/256 (11%)

Query: 16  KILANVFLLIFIIYPVFTVFLQSFYG-----SNG---------FTLDAYSKFISDSYYFG 61
           +I A  F+  +  + V  V+L    G     S G         F+ + + K ++      
Sbjct: 6   QIRARAFVKAWTAFVVLAVYLPILCGALAGLSKGRYFGFPIRVFSTEWWGKTLASLEIQT 65

Query: 62  ILKNSIVVACFSTIISIFLGFLFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFL 121
           +++NSI++A   T++S+ L F  ++   + ++K +  F+ A+ LP+  P  +  LA +  
Sbjct: 66  LVQNSILIAFIVTLVSVILAFFGALAFARYEWKGRKLFQKAILLPVFFPQPVLGLALLLW 125

Query: 122 FGRHGAVTYGLLGLEPNIYGWKSVVIMQSIDYTTTAFFIISAVLLGISGEFEDAARNLGS 181
           F          LG+ P+   W++ V+   +        +I+  +       E+AAR+LG+
Sbjct: 126 FNA--------LGINPS---WQTAVVAHLVWIVPVVTLVIAIQVYSFDPTLEEAARDLGA 174

Query: 182 NEFQVFKKVTFPLLIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLATASYFEIIGRYNT 241
           + + + +++T P+L PGI S  L  F+ S  +F   +   G  +T+    Y +++  Y+ 
Sbjct: 175 SRWFILREITLPILWPGIWSGALFAFLLSWGNFPLSLYTAGVDSTIPKWLYSKMVAGYSP 234

Query: 242 QM-----ASTLSVILL 252
            +      STLS   L
Sbjct: 235 MVPALGTMSTLSAAAL 250



 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 335 QLAIKNTLIYAMSS---SILVAFLGVAYSYIVYRGKFFGRKLMDLVITLPFAIPGTFMGL 391
           Q  ++N+++ A      S+++AF G A ++  Y  K  GRKL    I LP   P   +GL
Sbjct: 64  QTLVQNSILIAFIVTLVSVILAFFG-ALAFARYEWK--GRKLFQKAILLPVFFPQPVLGL 120

Query: 392 GYLLAFNNYPLLLTGTSSIIILNCMVRKLPFSFKTGNSVLSQVEESVEEASLNLGASRLK 451
             LL FN   L +  +    ++  +V  +P         +   + ++EEA+ +LGASR  
Sbjct: 121 ALLLWFN--ALGINPSWQTAVVAHLVWIVPVVTLVIAIQVYSFDPTLEEAARDLGASRWF 178

Query: 452 TFYNVVLPLLKPAIIFSMIYTFI 474
               + LP+L P I    ++ F+
Sbjct: 179 ILREITLPILWPGIWSGALFAFL 201