Pairwise Alignments

Query, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 564 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  135 bits (339), Expect = 5e-36
 Identities = 122/521 (23%), Positives = 238/521 (45%), Gaps = 42/521 (8%)

Query: 52  KFISDSYYFGILKNSIVVACFSTIISIFLGFLFSIIIFKTDFKFKNFFKIAVFLPIITPG 111
           + ++D   +   +N++  + F  +IS+ +G  F++ +   D + K+       LP++ P 
Sbjct: 49  RLLADPALWDAAQNTLSTSFFGMLISLAIGGAFALSLTLCDIRGKSILSFLFMLPMMIPP 108

Query: 112 FISSLAYVFLFGRHGAVTYGL-----LGLEPNIYGWKSVVIMQSIDYTTTAFFIISAVLL 166
            +++L+++ + G    +   +     +G    +Y    + ++  + +    +  + A LL
Sbjct: 109 QVTALSWIGMTGPSSTLLKAIGLAPAMGSPQPLYSIAGIALLLGVQHAPLVYLSLRAGLL 168

Query: 167 GISGEFEDAARNLGSNEFQVFKKVTFPLLIPGILSAGLLIFMQSMADFGTPIIVG--GNF 224
            +  +  +AA+  G++  +V   +  PL  PG+++   + F+ ++ +FG P I+G  G+ 
Sbjct: 169 ALPQDGIEAAKLSGASPRRVLFDIILPLSTPGLIAGAAISFVSNVGNFGIPAILGIPGSI 228

Query: 225 NTLATASY--FEIIGRYNTQMASTLSVILLFPSMALFYLYSKYHKGYELK----KSKITK 278
            TL T  Y  F   G       + LS ++   S+A   L  +  KG + +      K   
Sbjct: 229 FTLPTLIYSRFASFGTSTFGDIAILSTMIAIISVAGLALQERAMKGRDYRIIGLSGKAAT 288

Query: 279 YSLSNIQKVILGIPA-------VFFSIIAYLLFFAVFVASFTKSFGHNYAL---TLDYFY 328
           + L   +     +PA       + F ++A L   A+  +S   ++G   +L   TL  + 
Sbjct: 289 FGLGRWR-----VPAELALWLVLLFMLVAPLT--ALVASSLAPAYGVPLSLKTATLHAYE 341

Query: 329 EAI---SAGQLAIKNTLIYAMSSSILVAFLGVAYSYIVYRGKFFGRKLMDLVITLPFAIP 385
           E +   S  + A +N+L  A ++S+ +  + V  +Y + RGK     L+  ++ +P+A+P
Sbjct: 342 ELLYRQSVTRTAFRNSLFLATATSLCLLAVTVLTAYFLVRGKSRFMFLLSALVDIPYALP 401

Query: 386 GTFMGLGYLLAF-NNYPLL---LTGTSSIIILNCMVRKLPFSFKTGNSVLSQVEESVEEA 441
           G  + + ++L F    PLL   L GT  II+L         S K   S   Q + S+EEA
Sbjct: 402 GVVISVSFVLLFAAPIPLLGVTLYGTIWIILLAYFSSFFAVSLKPMVSAFLQFDPSLEEA 461

Query: 442 SLNLGASRLKTFYNVVLPLLKPAIIFSMIYTFIATIKSLGSIIFLMTANTKVLSAMVFES 501
           +   GA   +   +++LPL+ PA   S+I  F+     L     L +A T+ L  +++  
Sbjct: 462 ARLSGAGFWRRLKDIILPLVGPAAGASVILVFLIACNELTVSALLWSAGTQTLGVLIYNL 521

Query: 502 TINRQLGVGACYSMFMVILSII-----GILGILRLKGDKKW 537
             +    + +  S+ +VI+ II      ILG    KG   W
Sbjct: 522 DDSGSFDLASALSVLVVIMVIILMLLLEILGRYLPKGVVPW 562