Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 348 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 31/299 (10%)

Query: 48  LIADEFEKDTGIKMEYVSLSSGEALSRLKAEQSN-PSADVWLGGGIDAFISAQQDGLLEA 106
           ++A  F K TG  +    + + E +++L A + N P  DV +     A + A   GL+  
Sbjct: 49  ILAPYFVKRTGASVVQSPMLATEQIAKLTAAKGNQPPFDVAMLDEGPA-LEAIDAGLIAK 107

Query: 107 Y---KSPNAKDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYK 163
           Y   KSPN   ++P F  +  Y   +++  IGI  N   +       P +WDDL   +YK
Sbjct: 108 YDPAKSPNFAALNPKF--QGAYGPAITMQAIGIAYNPKTVKTP----PTSWDDLWKPEYK 161

Query: 164 GEL-IASNPTVSGTAYFTICGILQMYGEDE-----GWNYLDKFYQNTPFLTKRGSGPGNL 217
           G + I S  +  G A+  +  I ++ G  E     G+  L     N   ++      G L
Sbjct: 162 GRVGITSLASTLGLAF--LLDINRLAGGTEANMEPGFKKLKTLLPNLAAVSANFGAHGAL 219

Query: 218 VTAGEYAYGVAPDPHTTVIADSELPVKSVFLNK-VIWWPSPVSIVSGAKHPENAKIFVDW 276
              GE   GV        +    +P++ V ++     W + + IV+GA  PE A  +VD 
Sbjct: 220 FQQGEIDIGVQNFNFAEELKAKGVPIEFVRVDTGTPAWKTTMHIVAGALKPELAYAYVDS 279

Query: 277 CLSKEGQEVLMQA-------SPRVPVRGDIEVIEGVPNPKDLDFLDMDFMYWGE-NRDR 327
            +S + Q  + ++       S +VP  G +   +    P DLD   M F  W + N++R
Sbjct: 280 QISPDVQSEMQKSPWNVIPTSSKVPYAG-LVAEKIAKTPADLD--KMVFFDWAKVNQNR 335