Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 348 a.a., putative protein from Xanthobacter sp. DMC5

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)

Query: 59  IKMEYVSLSSGEA-LSRLKAEQSNPSADVWLGGGIDAFIS--AQQDGL---LEAYKSPNA 112
           IK+ +  L S  A L  L+A+++ P ADV +   +D  +S     +GL   ++    PN 
Sbjct: 56  IKVTFFPLPSSAAMLGNLRAQKAAPQADVVI---MDVSVSKAGTDEGLFTKIDETNIPNV 112

Query: 113 KDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASN-P 171
           KD+ P          GV+   + +L N + + E     P++W ++    YKG+++    P
Sbjct: 113 KDLYPNARIPSVAGVGVTFDNLVLLYNAEQVKEA----PKSWMEMAKAPYKGKVVIPGVP 168

Query: 172 TVSGTAYFTIC-----GILQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYG 226
            + G     I      G   +   D+G   + +   N      +      ++T G+ A G
Sbjct: 169 DIQGLGLVLILNKANGGTDYLASVDKGLAAVAEIAPNVQTWEPKPEVYAPIIT-GQAALG 227

Query: 227 VAPDPHTTVIAD-SELPVKSVFLNK-VIWWPSPVSIVSGAKHPENAKIFVDWCLSKEGQE 284
           V  +    V ++ S   +K+    +  I+  + +++V+GA   E AK FV++ LS E Q+
Sbjct: 228 VGYNARAQVNSEQSGGKIKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYALSPEAQK 287

Query: 285 VLMQASPRVPVRGDIEVIEGVPN---PKDLD-FLDMDFMYWGENRDRILDEWESR 335
              +     P     E+     +    K+LD  + +D++   + RD+I ++W  R
Sbjct: 288 SFTETMFYAPTNSKAEITGAALDRTAVKNLDKVMAVDWIALAQVRDKIAEQWRRR 342