Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 334 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 15/248 (6%)

Query: 57  TGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSPNAKDID 116
           TG+++   + +SG++L++L AE++ P ADV +  G+   + AQ+  +++ YK P A D  
Sbjct: 49  TGVQVPLDNKNSGQSLAQLVAEKAAPVADV-VYYGVTFGLQAQKAEVVDTYK-PKAWDQI 106

Query: 117 PLFVEED-GYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASNPTVSG 175
           P  +++  G+W  +   T+GI+ N D L   GLP P +W DL+  +YKG +   +P+ + 
Sbjct: 107 PAGLKDPAGHWFAIHSGTLGIMVNVDALG--GLPVPHSWADLLKPEYKGMVGYLDPSSAF 164

Query: 176 TAYFTICGILQMYGED-----EGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYGVAPD 230
             Y +   I +  G D        +Y  K  +NTP + K+ +     V +GE    V  D
Sbjct: 165 VGYVSAVAINRAMGGDLDNFAPAIDYFQKLAKNTPIVPKQTAYAR--VLSGELPILVDYD 222

Query: 231 --PHTTVIADSELPVKSVFLNKVIWWPSPVSIVSGAKHPENAKIFVDWCLSKEGQEVLMQ 288
              +     D       +     I  P  +S+V+ A H  NA+  +D+ LS EGQ +  +
Sbjct: 223 FNAYRARYKDKANVAFVIPEEGSISVPYVMSLVANAPHRANAQKVLDFVLSDEGQALWAK 282

Query: 289 ASPRVPVR 296
           A  R PVR
Sbjct: 283 AYLR-PVR 289