Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  131 bits (329), Expect = 3e-35
 Identities = 90/339 (26%), Positives = 154/339 (45%), Gaps = 14/339 (4%)

Query: 2   KNLKGILAIFCVMAVLVFAGCTEQQASNVSQEEQIVTVYVAYGSLDLIADEFEK-DTGIK 60
           K+L   +A+  V ++   A  T+       + EQ+ T   A          FEK +  I+
Sbjct: 3   KHLALAVAVSAVFSLQASAADTQLTVYTALEAEQLKTYKQA----------FEKANPDIE 52

Query: 61  MEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSPNAKDIDPLFV 120
           +++V  S+G   ++L AE+  P AD   G    +     Q+G+LEAY   +   I   + 
Sbjct: 53  IKWVRDSTGIITAKLLAEKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLGKISGNYR 112

Query: 121 EEDG--YWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASNPTVSGTAY 178
           +      W G+ +    I  NT    ++GL +P +W DL   +YKG+++  NP  SGT +
Sbjct: 113 DAANPPAWVGMDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGF 172

Query: 179 FTICGILQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYGVAPDPHTTVIAD 238
             +   LQ +GE +GW Y+D  +QN       GS P  L  AGE+  G++ +     +  
Sbjct: 173 LDVSAWLQTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKR 232

Query: 239 SELPVKSVFLNKVIWWP-SPVSIVSGAKHPENAKIFVDWCLSKEGQEVLMQASPRVPVRG 297
              P+  V   + + W     +++ G+   + AK   D+  S    E+  +    +   G
Sbjct: 233 QGAPLDIVLPKEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAVLAAPG 292

Query: 298 DIEVIEGVPNPKDLDFLDMDFMYWGENRDRILDEWESRY 336
             +    +P   +   +  DF++  +NRD+IL EW  RY
Sbjct: 293 IAKPQTELPADYEQRLIKNDFVWASKNRDQILAEWRKRY 331