Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 354 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 65/255 (25%), Positives = 102/255 (40%), Gaps = 28/255 (10%)

Query: 58  GIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFIS--AQQDGLLEAYKSPNAKDI 115
           G+K     +SS + L++ +AE+ N SAD+   G + A     A   G+ + YK      +
Sbjct: 64  GLKHSDTDMSSAQELAKFEAEKDNASADI---GDVGAAFGPIAVTKGVSQPYKPSTWDQV 120

Query: 116 DPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASNPTVSG 175
                ++DG+W      TI  + N DL+ E+    P+TW DL    YK   I    T + 
Sbjct: 121 PEWAKDKDGHWALAYTGTIAFIINKDLVKEE--ERPKTWHDLEKGKYK-VAIGDVGTAAQ 177

Query: 176 TAYFTICGILQMYGEDE----GWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYGVAPDP 231
            A   +   +   G++     G     K  Q         +     +  GE   GV  D 
Sbjct: 178 AANGVLAAAIAYKGDESNVAPGLQLFTKLAQQKRL--SLANPTIQTLEKGEVEVGVVWDF 235

Query: 232 HTTVIADSELPVKSVFLNKVIWWPSPVSIVSG--------AKHPENAKIFVDWCLSKEGQ 283
           +     +   P +   L      PS  S++SG        AKHP  AK+  ++  S  GQ
Sbjct: 236 NGLSYREQIDPKRFEVL-----IPSDGSVISGYTTVINKYAKHPNAAKLTREYIFSDAGQ 290

Query: 284 EVLMQASPRVPVRGD 298
             L +   R P+R +
Sbjct: 291 INLAKGHAR-PIRAE 304