Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 333 a.a., ABC transporter substrate-binding protein from Pantoea agglomerans CFBP13505 P0401

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 16/199 (8%)

Query: 99  QQDGLLEAYKSPNAKDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLI 158
           +++G L AY +     + P + + D  + G  ++   I  NT    ++  P   +W  L 
Sbjct: 101 KKEGQLYAYPAAPVSHLKPAYYDADKTFFGTKIIATVIAYNT----QRAKPV-SSWKALA 155

Query: 159 TDDYKGELIASNPTVSGTAYFTICGILQMYGEDEGWNYLDKFYQNTPFL---TKRGSGPG 215
            ++ +G++   +P  SG A + +     ++    GW     FYQ    +    + G+GP 
Sbjct: 156 VEENRGQIAVPSPLYSGAALYKLH--TDIHTPSIGW----AFYQQLAAIGIAPQGGNGPA 209

Query: 216 -NLVTAGEYAYGVAPDPHTTVIADSELPVKSVFLNK-VIWWPSPVSIVSGAKHPENAKIF 273
              V +G   YGV  D           P+  V+  + V +   PV+I+  A +   AK F
Sbjct: 210 LKAVASGMDKYGVITDADIIRAKKQGSPIDLVYPQEGVSYVTEPVAIMKSAHNLPAAKAF 269

Query: 274 VDWCLSKEGQEVLMQASPR 292
           VD+ LS+ GQ+++ +   R
Sbjct: 270 VDFMLSEAGQQLVAKQGNR 288