Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 445 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 71.2 bits (173), Expect = 5e-17
 Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 11/201 (5%)

Query: 115 IDPLFVEED-GYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGEL---IASN 170
           +D  FV +  G++    +   G++ N   L+   LP+P TW DL    + G+L   IA  
Sbjct: 114 VDGQFVSDRRGFFEAFEVAGYGLIVNPAALARDRLPQPATWRDLAATRWTGQLALPIAGQ 173

Query: 171 PTVSGTAYFTICGILQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYGVAPD 230
              SG  Y  +   LQ  G + GW  L +   +   +   G    ++V  GE    V  D
Sbjct: 174 VGFSGALYDIL---LQAEGWEAGWALLGEAAADATLVGSGGQVSESVVN-GEADVAVTVD 229

Query: 231 PHTTVIADSELPVKSVFLNKVIWWPSPVSIVSGAKHPENAKIFVDWCLSKEGQEVLMQAS 290
                   +  PV  V+  +  + P+ V+I   A HP+ A+ FVD+ LS  GQ +L    
Sbjct: 230 FFARSAIANGHPVALVYPPRTAFLPAQVAITRAAPHPDAARAFVDFVLSAPGQALLFHPD 289

Query: 291 -PRVPVRGDI--EVIEGVPNP 308
             R PVR D+  +   G  NP
Sbjct: 290 IRRYPVRPDVYAQAPAGTVNP 310