Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 63/203 (31%), Positives = 84/203 (41%), Gaps = 45/203 (22%)

Query: 44  DDCICCGLCVDVCPTNAISVFKFRDII---------------------------CEHCGA 76
           D C+ C  C   CPT AI +  F+  I                           C+  GA
Sbjct: 9   DACLVCNACAKACPTEAIEIAPFKTCIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGA 68

Query: 77  CLNVCPVDAIEK--NRFSVDPEKCIKCGVCSIFCTIPIL---------KNEIPVLNVP-E 124
           C   CPV  I+K  +RF      C+ C  C   C   I+         K EI +   P  
Sbjct: 69  CQKACPV-GIKKVDDRFPYSKGHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIA 127

Query: 125 VTTECNNCKLCIQKCPQKAISFEDGKISINSKCNLCLKCVEFCPLNAL----KSPKESLK 180
           VT +C  C +C+ +CP  AIS ED  +    KC  C  C + CP NA+    K P++  K
Sbjct: 128 VTKDCVACGVCVPECPVDAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQK 187

Query: 181 S-KIIKVDLNSCIFCKDCEEICP 202
           + K   V+   CI C+ C E CP
Sbjct: 188 TIKSFTVNEEECIGCEKCVEACP 210



 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 58/203 (28%), Positives = 78/203 (38%), Gaps = 40/203 (19%)

Query: 42  ELDDCICCGLCVDVCPTNAISV--------------FKFRDIICEHCGACLNVCPVDAIE 87
           + D CI C +C   CP NAI V              F   +  C  C  C+  CP   IE
Sbjct: 156 DTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIE 215

Query: 88  KNRFSVD---PEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTE--------CNNCKLCI 136
            N   +    PE C  CG+C   C + ++  E+   +   VT E        C  C  C 
Sbjct: 216 YNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCA 275

Query: 137 QKCPQKAISFEDGK-ISINSK-----------CNLCLKCVEFCPLNALKSPK---ESLKS 181
            KCP  AI   + K + + SK           C  C  C   CP  ALK  K   E  + 
Sbjct: 276 IKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEY 335

Query: 182 KIIKVDLNSCIFCKDCEEICPVK 204
             ++     C  C +C ++CP K
Sbjct: 336 ARVEFSPALCNECGECVDVCPQK 358



 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 55/185 (29%), Positives = 76/185 (41%), Gaps = 39/185 (21%)

Query: 33  EVIGETTNPELDD-CICCGLCVDVCPTNAISV--------------FKFRDIICEHCGAC 77
           E  GE    +L + C  CGLCV+ CP   IS+                + +  C +CG C
Sbjct: 215 EYNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPC 274

Query: 78  LNVCPVDAIE-------------KNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPE 124
              CP  AI+             K   + +   CI+CG C++ C    LK    V    E
Sbjct: 275 AIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKE 334

Query: 125 VTTE------CNNCKLCIQKCPQKAISFE-DGKISINSKCNLCLKCVEFCPLNALKSPKE 177
                     CN C  C+  CPQK +    D K+ +   C +CLKC+E C     K+ KE
Sbjct: 335 YARVEFSPALCNECGECVDVCPQKTLELTGDDKMPLKGYCVMCLKCIEACN----KTKKE 390

Query: 178 SLKSK 182
           +L  K
Sbjct: 391 ALSLK 395



 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 15/114 (13%)

Query: 92  SVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFEDGKI 151
           S+  + C+ C  C+  C  P    EI           C  C  C   CP  A+  +DGK+
Sbjct: 5   SIQEDACLVCNACAKAC--PTEAIEIAPFKT------CIQCFSCATACPTGALVEKDGKL 56

Query: 152 SIN-SKCNLCLKCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEEICPVK 204
             N SKC+L   C + CP+   K       SK        C+ C+ C EICP +
Sbjct: 57  VFNGSKCDLDGACQKACPVGIKKVDDRFPYSK------GHCVLCEKCVEICPAE 104



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 6/21 (28%), Positives = 12/21 (57%)

Query: 184 IKVDLNSCIFCKDCEEICPVK 204
           I +  ++C+ C  C + CP +
Sbjct: 4   ISIQEDACLVCNACAKACPTE 24