Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score =  103 bits (256), Expect = 7e-27
 Identities = 63/187 (33%), Positives = 87/187 (46%), Gaps = 34/187 (18%)

Query: 46  CICCGLCVDVCPTNAISVFKFRDIICEHCGACLNVCPVDAIEKNRFSVDPEKCIKCGVCS 105
           C+ CG C+ +CP + I   +  D  C  C  C  VCPVDAIE  + +   E CI CG C 
Sbjct: 181 CVECGKCIYLCPKDTIIEAEMVDG-CTRCNICNEVCPVDAIEYGQVT---ENCILCGNCI 236

Query: 106 IFCTIPILK-NEIPVLNVPEVTT-----ECNNCKLCIQKCPQKAISFEDGKISINSK-CN 158
             C   +L+ +E  V+   E         C NC LC+ KCP  A+ FE+GKI  + K C 
Sbjct: 237 SKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRFENGKILYDPKTCT 296

Query: 159 LCLKCVEFCP-------------------LNALKSPKESL----KSKIIKVDLNSCIFCK 195
           LC  CV+ CP                   L   + P++++    +SK   +D   CI C 
Sbjct: 297 LCNTCVKECPQGVRINKGEFVDGGCVLCELCIKECPEDAISIKERSKFTSIDKEECIACG 356

Query: 196 DCEEICP 202
            C  +CP
Sbjct: 357 TCSMVCP 363



 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 35/185 (18%)

Query: 44  DDCICCGLCVDVCPTNAISVFKFRDI------------ICEHCGACLNVCPVDAI--EKN 89
           ++CI CG C+  CP + + + +F+ +             C +CG C++ CP +A+  E  
Sbjct: 227 ENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRFENG 286

Query: 90  RFSVDPEKCIKCGVCSIFCT--IPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFE 147
           +   DP+ C  C  C   C   + I K E        V   C  C+LCI++CP+ AIS +
Sbjct: 287 KILYDPKTCTLCNTCVKECPQGVRINKGEF-------VDGGCVLCELCIKECPEDAISIK 339

Query: 148 DGK--ISIN-SKCNLCLKCVEFCPLNALKSPKESLK-------SKIIKVDLNSCIFCKDC 197
           +     SI+  +C  C  C   CP +A+    +SL        SK+I  D  +C+ C+ C
Sbjct: 340 ERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFND--NCVICEKC 397

Query: 198 EEICP 202
              CP
Sbjct: 398 AIHCP 402



 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 54/182 (29%), Positives = 75/182 (41%), Gaps = 18/182 (9%)

Query: 39  TNPELDDCICCGL--CVDVCPTNAISVFKFRDIICEHCGACLNVCPVDAIEKNRFS---V 93
           T  E +DC    +  C++VCPTNAI +   +   C  CG C   CP  AI+KN +    V
Sbjct: 11  TYEECEDCKNKEISKCMEVCPTNAIKMIDGKAFSCITCGTCAKECPTGAIKKNEYGGYYV 70

Query: 94  DPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFEDGKISI 153
           + + C  CG+C   C I I+            T  C  C LC  +CP  A  + D     
Sbjct: 71  NRKLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECPYNARLYFDPSSLK 130

Query: 154 NSKCNLCL-----------KCVEFCPLNALK--SPKESLKSKIIKVDLNSCIFCKDCEEI 200
           N+K  + +           K  EF     +K   P E      I +D   C+ C  C  +
Sbjct: 131 NTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCIYL 190

Query: 201 CP 202
           CP
Sbjct: 191 CP 192



 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 58/212 (27%), Positives = 79/212 (37%), Gaps = 62/212 (29%)

Query: 46  CICCGLCVDVCPTNA------------------------------ISVFKFRDIICEHCG 75
           CI CGLCVD CP+NA                              I+  +F D  C  C 
Sbjct: 266 CINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECPQGVRINKGEFVDGGCVLCE 325

Query: 76  ACLNVCPVDAI---EKNRF-SVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPE------- 124
            C+  CP DAI   E+++F S+D E+CI CG CS+ C    +   I  LN          
Sbjct: 326 LCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKV 385

Query: 125 -VTTECNNCKLCIQKCPQKAISFEDGKISI-----------NSKCNLCLKCVEFCPLNAL 172
                C  C+ C   CP+  I    G   +           N  C  C  C   CP +A+
Sbjct: 386 IFNDNCVICEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAI 445

Query: 173 KSPKESLKSKIIKVDLNSCIFCKDCEEICPVK 204
              +         ++   C +C  C  ICP +
Sbjct: 446 DKGE---------INTEKCEYCSACVNICPTR 468



 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 29/154 (18%)

Query: 46  CICCGLCVDVCPTNAISV---FKFRDII---CEHCGACLNVCPVDAI----EKNRFS--- 92
           C+ C LC+  CP +AIS+    KF  I    C  CG C  VCP DAI    +   FS   
Sbjct: 321 CVLCELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNK 380

Query: 93  -----VDPEKCIKCGVCSIFCTIPILKNEIPVLNVPE-----VTTE---CNNCKLCIQKC 139
                +  + C+ C  C+I C   +++N      V +     + T+   C  C LC   C
Sbjct: 381 VHSKVIFNDNCVICEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIIC 440

Query: 140 PQKAISFEDGKISINSKCNLCLKCVEFCPLNALK 173
           P  AI  + G+I+   KC  C  CV  CP  A++
Sbjct: 441 PNDAI--DKGEIN-TEKCEYCSACVNICPTRAIR 471



 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 42/136 (30%), Positives = 57/136 (41%), Gaps = 40/136 (29%)

Query: 39  TNPELDDCICCGLCVDVCPTNAISV-----------------FKFRDIICEHCGACLNVC 81
           T+ + ++CI CG C  VCP +AI+V                 F    +ICE C      C
Sbjct: 345 TSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEKCAI---HC 401

Query: 82  PVDAI------------EKNRFSVDPEKCIKCGVCSIFC-TIPILKNEIPVLNVPEVTTE 128
           P D I            E +    D + C+KCG+C+I C    I K EI        T +
Sbjct: 402 PRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAIDKGEIN-------TEK 454

Query: 129 CNNCKLCIQKCPQKAI 144
           C  C  C+  CP +AI
Sbjct: 455 CEYCSACVNICPTRAI 470



 Score = 30.0 bits (66), Expect = 7e-05
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 44  DDCICCGLCVDVCPTNAISVFK 65
           + C  C  CV++CPT AI +++
Sbjct: 453 EKCEYCSACVNICPTRAIRIYR 474