Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 254 a.a., 4Fe-4S dicluster domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 23/111 (20%)

Query: 105 SIFCTIPILKNEIPVLNVPEVTTE------CNNCKLCIQKCPQKAISFED-------GKI 151
           S+F   P+L+   P L  P    E      C  C  C+Q CP KAI   D       G  
Sbjct: 38  SLFGFFPVLRKWTPRLRPPGAIDEADFLAACIKCGQCVQVCPVKAIELGDLDEGFGVGVP 97

Query: 152 SINSKCNLC------LKCVEFCPLNALK---SPKESLKSKIIKVDL-NSCI 192
            + ++   C      ++CV  CP  AL    S KE ++  + ++D  N+C+
Sbjct: 98  YVPARAQACDFSCDAVQCVLACPTGALSHKISKKEEVRMGLARLDRPNACL 148



 Score = 32.3 bits (72), Expect = 8e-06
 Identities = 43/201 (21%), Positives = 70/201 (34%), Gaps = 71/201 (35%)

Query: 46  CICCGLCVDVCPTNAISV-------------FKFRDIICE-HCGA--CLNVCPVDAIEKN 89
           CI CG CV VCP  AI +                R   C+  C A  C+  CP  A+   
Sbjct: 68  CIKCGQCVQVCPVKAIELGDLDEGFGVGVPYVPARAQACDFSCDAVQCVLACPTGALS-- 125

Query: 90  RFSVDPEKCIKCGVCSI-------------------------FCTIPILKNEIPVLNVPE 124
              +  ++ ++ G+  +                             P +    PV  + E
Sbjct: 126 -HKISKKEEVRMGLARLDRPNACLARKGEGFKGVARPAPFKGVHRYPEIDRWKPV-KLAE 183

Query: 125 VTTECNNCKLCIQKCP-QKAISFEDGKISINSKCNLCLKCVEFCPLNALKSPKESLKSKI 183
              +   C LC+++CP Q AI+ E                    P++A   P +  ++ +
Sbjct: 184 YKYDLAVCDLCVRECPVQGAITLE--------------------PMSA--DPADKRRTPV 221

Query: 184 IKVDLNSCIFCKDCEEICPVK 204
           +      C+ C  CE ICP +
Sbjct: 222 VH---QPCVGCGMCEMICPTE 239



 Score = 27.3 bits (59), Expect = 2e-04
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 46  CICCGLCVDVCPTNAISV 63
           C+ CG+C  +CPT   S+
Sbjct: 226 CVGCGMCEMICPTEPASI 243



 Score = 26.6 bits (57), Expect = 4e-04
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 188 LNSCIFCKDCEEICPVK 204
           L +CI C  C ++CPVK
Sbjct: 65  LAACIKCGQCVQVCPVK 81



 Score = 25.0 bits (53), Expect = 0.001
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 13/53 (24%)

Query: 45  DCICCGLCVDVCPT---------NAISVFKFRDII----CEHCGACLNVCPVD 84
           D   C LCV  CP          +A    K R  +    C  CG C  +CP +
Sbjct: 187 DLAVCDLCVRECPVQGAITLEPMSADPADKRRTPVVHQPCVGCGMCEMICPTE 239