Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 658 a.a., glutamate synthase small subunit family protein, proteobacterial from Enterobacter asburiae PDN3

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 23/137 (16%)

Query: 89  NRFSV-DPEKCIKCGVCSIFCTIP------ILKNE-----IPVLNVPEVTTE--CNNCKL 134
           NRF + + ++CI C  C + C +       +L        I VL   E ++   C++C+ 
Sbjct: 2   NRFIMANSQQCIGCRACEVACVMAHNDEQHVLSERHFHPRITVLRAGEKSSPVTCHHCEN 61

Query: 135 --CIQKCPQKAISFEDGKISINS-KCNLCLKCVEFCPLNALKSPKESLKSKIIKVDLNSC 191
             C Q CP  AIS  D  + +N  KC  C  CV  CP   ++     L +  +K   N C
Sbjct: 62  APCAQSCPNGAISKCDDSVQVNQQKCIGCKACVVACPFGTMEIIVTPLDNGSVKASANKC 121

Query: 192 IFC------KDCEEICP 202
             C        C E CP
Sbjct: 122 DLCLTRPHGPACIENCP 138



 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 13/94 (13%)

Query: 65  KFRDIICEHC--GACLNVCPVDAIEK--NRFSVDPEKCIKCGVCSIFCTIPILKNEIPVL 120
           K   + C HC    C   CP  AI K  +   V+ +KCI C  C + C    ++  +  L
Sbjct: 50  KSSPVTCHHCENAPCAQSCPNGAISKCDDSVQVNQQKCIGCKACVVACPFGTMEIIVTPL 109

Query: 121 NVPEVTTECNNCKL---------CIQKCPQKAIS 145
           +   V    N C L         CI+ CP   +S
Sbjct: 110 DNGSVKASANKCDLCLTRPHGPACIENCPADVLS 143



 Score = 24.6 bits (52), Expect = 0.004
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 15/56 (26%)

Query: 46  CICCGLCVDVCPTNAISVF---------KFRDIICEHC------GACLNVCPVDAI 86
           CI C  CV  CP   + +          K     C+ C       AC+  CP D +
Sbjct: 87  CIGCKACVVACPFGTMEIIVTPLDNGSVKASANKCDLCLTRPHGPACIENCPADVL 142