Pairwise Alignments

Query, 392 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 740 a.a., transporter, CPA2 family from Bacteroides ovatus ATCC 8483

 Score =  134 bits (337), Expect = 9e-36
 Identities = 104/399 (26%), Positives = 202/399 (50%), Gaps = 24/399 (6%)

Query: 3   ISWVLFTIGIAIIFGKLGDHLMNKLGFPGVLGEMIMGMILGNLVYFGLVSPD--HLTIQN 60
           ++ +L  I   ++  +L  +L + +G PGV+GE++ G++LG  V  G   PD  H     
Sbjct: 64  LTTLLIQIIAVLLMVRLFGYLFSLIGQPGVIGEIVAGIVLGPSV-LGFFFPDAFHFLFPA 122

Query: 61  NEI--FDFLSRLGIIFLLFLGGLDTDLSVLKKTGKIATVSTVFGVLVPLVMGYLALQ--Y 116
           + +   + LS++G+I  +F+ G++ D SVLK       V +  G+LVP  +G L+    Y
Sbjct: 123 HSLTNLELLSQVGLILFMFVIGMELDFSVLKNKINETLVISHAGILVPFFLGILSSYWVY 182

Query: 117 MGYTAAES----FAG--GVVLTATSIGITVRVMMDMGVLKSEVGAASLSASIMDDFLG-- 168
             Y AA++    FA   G+ ++ T+  +  R++ +  + K+ +G  +++++  DD     
Sbjct: 183 EEYAAAQTPFLPFALFIGISMSITAFPVLARIIQERNMTKTPLGTLTIASAANDDVTAWC 242

Query: 169 IMLIIFAVG-TGSILGLLGK--FAIFFIITGFLAMKLVNKFIS--FSEKLHVEKGILSLA 223
           ++ ++ A+   GS  G L     A+ +I   FL ++   K +   ++ +  + K  ++  
Sbjct: 243 LLAVVIAISKAGSFAGALYSVGLAVVYIAVMFLVVRPFLKKVGEVYANREAINKTFVAFI 302

Query: 224 IAVMFLFSFLAENWFEAAIEGSFMAGLVL-SRTAEGKNLIEDVKTIGYSILIPLFFVYTG 282
           + ++ + S L E     A+ G+FMAG+V+ S     K ++E V+ I     +PLFF +TG
Sbjct: 303 LLILIISSCLTEIIGIHALFGAFMAGVVMPSNLGFRKVMMEKVEDISLVFFLPLFFAFTG 362

Query: 283 ASLNLTIFGDFDALYLALVLTAIAIVSKVVGRGFGARIMGWNMKKSLQMGIGSIPRAEIA 342
               + +    +   + L+L  +A+V K+ G    AR++G + K SL +G     R  + 
Sbjct: 363 LRTEIGLINSPELWMVCLLLVTVAVVGKLGGCAIAARLVGESWKDSLTIGTLMNTRGLME 422

Query: 343 LINLMVAIHAGVISESNVGKFIAATMIFITISIISTPPL 381
           L+ L +    GV+  S    F+   ++ +  + ++TP L
Sbjct: 423 LVALNIGYEMGVLPPS---IFVILVIMALVTTFMTTPLL 458