Pairwise Alignments

Query, 383 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 401 a.a., tetracycline efflux MFS transporter Tet(B) from Escherichia coli ECRC62

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 91/361 (25%), Positives = 162/361 (44%), Gaps = 31/361 (8%)

Query: 13  ITIFVTML---GIGLISP----LLAIFAKSYGLSNFQIGLIFGSFALVRTIFQLPAGTLS 65
           I + +T+L   GIGLI P    LL  F  S  ++N   G++   +AL++ IF    G +S
Sbjct: 7   IALVITLLDAMGIGLIMPVLPTLLREFIASEDIAN-HFGVLLALYALMQVIFAPWLGKMS 65

Query: 66  DSYGKKVFLVGGTLLYGVTTLFYGFASGFASILIVRTFTGVFSAFVNPVAGSYIAQTSPK 125
           D +G++  L+   +   +  L   F+S    + + R  +G+  A    VA S IA T+  
Sbjct: 66  DRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGA-TGAVAASVIADTTSA 124

Query: 126 SKLGEYMGLFNSAISLGFGVGPLLGGLLADMYGFMVPFYVGGLLGIIASIIAYFKLEDTP 185
           S+  ++ G   ++  LG   GP++GG   ++     PF++  LL I+A ++  F   +T 
Sbjct: 125 SQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHS-PFFIAALLNIVAFLVVMFWFRETK 183

Query: 186 KTQE----------KQKLSWKNLF-SLEFLKMRNFSAAFIINIALTISRGAILAYLAIYA 234
            T++          +    +  LF ++  L +  FSA  I  I  T+       ++    
Sbjct: 184 NTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYFSAQLIGQIPATV-------WVLFTE 236

Query: 235 YDYGVSAFKIGVMLAAMNLVLAVTQK-MFGRIFDEKGNR-IILHGIIIGNLGMFILAMST 292
             +G ++  +G  LA + L+ +V Q  + GRI  + G +  +L G I  +     LA  +
Sbjct: 237 NRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFIS 296

Query: 293 SFTTMFISLIISSIGASMSTPGINSIAIRDIPDKRQGEAMGLYTASINVGIFFGAVLLGY 352
               +F  LI+ + G  ++ P +  +        +QG   GL  +  N     G +L   
Sbjct: 297 EGWLVFPVLILLA-GGGIALPALQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAV 355

Query: 353 I 353
           I
Sbjct: 356 I 356