Pairwise Alignments

Query, 65 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 161 a.a., NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score = 49.7 bits (117), Expect = 9e-12
 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 9/62 (14%)

Query: 3   YKVNEDECIACGACVPVCPVQAISENA----DG-----KAVIDCAKCNDCGDCSDVCPVE 53
           Y   E+ CIAC  C  +CP QAI+  A    DG     +  ID  KC  CG C + CPV+
Sbjct: 55  YPNGEERCIACKLCEAICPAQAITIEAQPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVD 114

Query: 54  CI 55
            I
Sbjct: 115 AI 116



 Score = 31.2 bits (69), Expect = 3e-06
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 3   YKVNEDECIACGACVPVCPVQAISE 27
           Y ++  +CI CG C   CPV AI E
Sbjct: 94  YDIDMTKCIYCGFCQEACPVDAIVE 118