Pairwise Alignments

Query, 65 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 52.4 bits (124), Expect = 3e-12
 Identities = 25/47 (53%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 9   ECIACGACVPVCPVQAISENADGKAVIDCAKCNDCGDCSDVCPVECI 55
           +C+ACG CVP CPV AIS   +  AVID  KC  C  CS  CP   I
Sbjct: 131 DCVACGVCVPECPVDAIS--IEDIAVIDTDKCIYCTVCSQTCPWNAI 175



 Score = 50.4 bits (119), Expect = 1e-11
 Identities = 24/56 (42%), Positives = 28/56 (50%)

Query: 3   YKVNEDECIACGACVPVCPVQAISENADGKAVIDCAKCNDCGDCSDVCPVECIKQE 58
           + VNE+ECI C  CV  CP   I  N +   V     C  CG C + CPVE I  E
Sbjct: 192 FTVNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLE 247



 Score = 43.9 bits (102), Expect = 1e-09
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 10  CIACGACVPVCPVQAISENA---DGKAV----IDCAKCNDCGDCSDVCPVECIK 56
           CI CGAC   CP  A+       +GK         A CN+CG+C DVCP + ++
Sbjct: 308 CIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLE 361



 Score = 40.8 bits (94), Expect = 9e-09
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 22/70 (31%)

Query: 5  VNEDECIACGACVPVCPVQAIS----------------------ENADGKAVIDCAKCND 42
          + ED C+ C AC   CP +AI                          DGK V + +KC+ 
Sbjct: 6  IQEDACLVCNACAKACPTEAIEIAPFKTCIQCFSCATACPTGALVEKDGKLVFNGSKCDL 65

Query: 43 CGDCSDVCPV 52
           G C   CPV
Sbjct: 66 DGACQKACPV 75



 Score = 35.0 bits (79), Expect = 5e-07
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 15/69 (21%)

Query: 3   YKVNEDECIACGACVPVCPVQAISENADGKA-------------VIDCAKCNDCGDCSDV 49
           +  ++  C+ C  CV +CP + IS    GKA             +     C  CG C   
Sbjct: 84  FPYSKGHCVLCEKCVEICPAEIIS--LPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPE 141

Query: 50  CPVECIKQE 58
           CPV+ I  E
Sbjct: 142 CPVDAISIE 150



 Score = 34.3 bits (77), Expect = 9e-07
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 10/64 (15%)

Query: 6   NEDECIACGACVPVCPVQAIS-ENADG---------KAVIDCAKCNDCGDCSDVCPVECI 55
           +E++C  CG C   CP  AI   N  G         +   + A C  CG C+  CP   +
Sbjct: 264 SEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGAL 323

Query: 56  KQEK 59
           K  K
Sbjct: 324 KMGK 327



 Score = 30.8 bits (68), Expect = 1e-05
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 10  CIACGACVPVCPVQAISENADGKAVIDCAKCNDCGDCSDVC 50
           C  CG CV VCP + +    D K  +    C  C  C + C
Sbjct: 345 CNECGECVDVCPQKTLELTGDDKMPLK-GYCVMCLKCIEAC 384



 Score = 30.0 bits (66), Expect = 2e-05
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 9/61 (14%)

Query: 5   VNEDECIACGACVPVCPVQAI---------SENADGKAVIDCAKCNDCGDCSDVCPVECI 55
           ++ D+CI C  C   CP  AI          +       ++  +C  C  C + CP   I
Sbjct: 155 IDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMI 214

Query: 56  K 56
           +
Sbjct: 215 E 215



 Score = 23.5 bits (49), Expect = 0.002
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 40 CNDCGDCSDVCPVECIK--QEKTCGCC 64
          C  C  C+  CP E I+    KTC  C
Sbjct: 11 CLVCNACAKACPTEAIEIAPFKTCIQC 37