Pairwise Alignments

Query, 182 a.a., XRE family transcriptional regulator from Methanococcus maripaludis S2

Subject, 228 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 59.7 bits (143), Expect = 4e-14
 Identities = 46/185 (24%), Positives = 92/185 (49%), Gaps = 10/185 (5%)

Query: 4   LNKAISKNLKKIRKKKDLSLDALSNLTGVSKSMLGQIERGEVNPTISTILKISNGLKVSF 63
           L +A+   ++ IR++ DL++  L+   G+S  ML +IE G+++P+++T+  IS  L V  
Sbjct: 41  LEEALGVQVRSIRRELDLTVSDLAGAAGISVGMLSKIENGQISPSLATLQSISKALNVPL 100

Query: 64  TSLLK--NEKPEIDQIPFEELNPVFEGEGHKL---YPVI--PFEDDKRFETYIVEIKPGH 116
           T+L     E+ +   +  ++   + E  G K+   Y ++      D   E Y++ +    
Sbjct: 101 TTLFSAFEERRDCSFVKAQQ-GVIIERRGTKVGHQYELLGHGLGGDIVVEPYLITLTEEA 159

Query: 117 KYYSEGHVKGTEEIITVFEGELLISIGEIDYFLKKNDTIRFNANKSHVYENR-GLKLTKL 175
             Y+ G      E I +  GE+L    +  Y L+  D + F++  +H  E+     +T L
Sbjct: 160 APYT-GFRHAGVEFIYMLSGEVLYRHADRTYHLRPGDALMFDSGAAHGPEDLIKAPMTYL 218

Query: 176 NLILH 180
           ++I++
Sbjct: 219 SIIVY 223