Pairwise Alignments

Query, 182 a.a., XRE family transcriptional regulator from Methanococcus maripaludis S2

Subject, 182 a.a., DNA-binding transcriptional repressor PuuR-putrescine from Pseudomonas putida KT2440

 Score = 57.4 bits (137), Expect = 1e-13
 Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 3/163 (1%)

Query: 8   ISKNLKKIRKKKDLSLDALSNLTGVSKSMLGQIERGEVNPTISTILKISNGLKVSFTSL- 66
           + + L+ IRK K LS   L+   GV+ S +  IE+  V+P+IS++ K+ +G+ +S     
Sbjct: 3   VGERLQAIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLRKVLSGIPMSMVEFF 62

Query: 67  -LKNEKPEIDQIPFEELNPVFEGEGHKLYPVIPFEDDKRFETYIVEI-KPGHKYYSEGHV 124
            ++ E     QI ++    +   +G     ++      R   ++ E+  PG    +E   
Sbjct: 63  SVELEPQSPTQIVYKAHELIDISDGAVTMKLVGKSHPNRAIAFLTEVYPPGADTGAEMLT 122

Query: 125 KGTEEIITVFEGELLISIGEIDYFLKKNDTIRFNANKSHVYEN 167
              EE   + EG L + +G   + L++ D+  F + + H + N
Sbjct: 123 HDGEETGILLEGRLELVVGNEIFVLEEGDSYYFESTRPHRFRN 165