Pairwise Alignments

Query, 182 a.a., XRE family transcriptional regulator from Methanococcus maripaludis S2

Subject, 178 a.a., Transcriptional regulator yidN, Cro/CI family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 89.4 bits (220), Expect = 3e-23
 Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 10/183 (5%)

Query: 1   MKDLNKAISKNLKKIRKKKDLSLDALSNLTGVSKSMLGQIERGEVNPTISTILKISNGLK 60
           M +L   ++  L+ +R ++  SL  L+ ++GVSK+MLGQIER E +PT++T+ KI+ GL 
Sbjct: 1   MDNLTHYLATTLRTLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLN 60

Query: 61  VSFTSLLKNEKPEIDQIPFEELNPVFEGEGHKLY--PVIPFEDDKRFETYIVEIKPGHKY 118
           V F+  +          P  E  P F+ +   +   P+ P++ +  F+ + + + PG   
Sbjct: 61  VPFSVFISP--------PQAEFPPTFDPQQQAMVITPLFPWDPELCFDYFSLLLAPGTVS 112

Query: 119 YSEGHVKGTEEIITVFEGELLISIGEIDYFLKKNDTIRFNANKSHVYENRGLKLTKLNLI 178
            S  H  G  E + V +G L +  G +   +     +RF  + +H Y N   +    + +
Sbjct: 113 ESTPHKAGVIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSSDQTVHFHSL 172

Query: 179 LHY 181
           +HY
Sbjct: 173 IHY 175