Pairwise Alignments

Query, 182 a.a., XRE family transcriptional regulator from Methanococcus maripaludis S2

Subject, 178 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 95.1 bits (235), Expect = 6e-25
 Identities = 54/181 (29%), Positives = 100/181 (55%), Gaps = 6/181 (3%)

Query: 1   MKDLNKAISKNLKKIRKKKDLSLDALSNLTGVSKSMLGQIERGEVNPTISTILKISNGLK 60
           M++L + +S  LK++R+++  SL  L+  TGVSK+MLGQIER E +PT++T+ KI+ GL 
Sbjct: 1   MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60

Query: 61  VSFTSLLKNEKPEIDQIPFEELNPVFEGEGHKLYPVIPFEDDKRFETYIVEIKPGHKYYS 120
           V F++ +   +     +     +P  + +   +  + P++    FE + +++  G    S
Sbjct: 61  VPFSTFISPPQSATPSV----YDP--QQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114

Query: 121 EGHVKGTEEIITVFEGELLISIGEIDYFLKKNDTIRFNANKSHVYENRGLKLTKLNLILH 180
             H KG  E + V +G+L + +      L   + +RF A+ +H+Y N G +    + ++H
Sbjct: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174

Query: 181 Y 181
           Y
Sbjct: 175 Y 175