Pairwise Alignments

Query, 182 a.a., XRE family transcriptional regulator from Methanococcus maripaludis S2

Subject, 185 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score = 62.8 bits (151), Expect = 3e-15
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 11/181 (6%)

Query: 1   MKDLNKAISKNLKKIRKKKDLSLDALSNLTGVSKSMLGQIERGEVNPTISTILKISNGLK 60
           M D   A  K L +IR+++ LS    + L+G++ S +  IE+ +V+P IST+ K+     
Sbjct: 1   MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG 60

Query: 61  VSFTSLLKN-EKPEIDQIPFEELNPVFEGEGHKLYPVIPFEDDKR-----FETYIVEIKP 114
           +S +      EKP+  Q+   + + +  G       ++   +  R     FETY      
Sbjct: 61  LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT 120

Query: 115 GHKYYSEGHVKGTEEIITVFEGELLISIGEIDYFLKKNDTIRFNANKSHVYENRGLKLTK 174
           G +   +G     EEI TV EGE++++I   DY L    +   N    H + N    + +
Sbjct: 121 GERIKHQG-----EEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICR 175

Query: 175 L 175
           +
Sbjct: 176 I 176