Pairwise Alignments

Query, 182 a.a., XRE family transcriptional regulator from Methanococcus maripaludis S2

Subject, 187 a.a., DNA-binding transcriptional repressor PuuR from Alteromonas macleodii MIT1002

 Score = 90.1 bits (222), Expect = 2e-23
 Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 5/179 (2%)

Query: 4   LNKAISKNLKKIRKKKDLSLDALSNLTGVSKSMLGQIERGEVNPTISTILKISNGLKVSF 63
           ++++I+++L+ +RK + LSLD  + LTGVSK+MLGQIERGE +PTI+T+ KI+ GL  SF
Sbjct: 11  ISRSIAQHLQSVRKARGLSLDKTAQLTGVSKAMLGQIERGESSPTIATLWKIATGLACSF 70

Query: 64  TSLLKNEKPEIDQIPFEELNPVFEGEGHKLYPVIPFEDDKRFETYIVEIKPGHKYYSEGH 123
           +S L  +  E         N         +  + PF    +FE + + +   H+ +S  H
Sbjct: 71  SSFLSGD--ETAPTSQRADNKFANDPNVTIKTLFPFNSATQFEMFELCLTDFHEQHSSAH 128

Query: 124 VKGTEEIITVFEGEL-LISIGEIDYFLKKNDTIRFNANKSHVYENRGLKLTKLNLILHY 181
             G  E I V +G+L ++  G+   +  +   I   A++ H Y +  +  T+  +++HY
Sbjct: 129 QIGVTEHIHVLQGKLGVLQDGQWQTYQAQAQCI-LRADQPHGYRDE-VGETRFIVVIHY 185